Methanococcoides burtonii: Mbur_1388
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Entry
Mbur_1388 CDS
T00341
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mbu
Methanococcoides burtonii
Brite
KEGG Orthology (KO) [BR:
mbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbu03016
]
Mbur_1388
Enzymes [BR:
mbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Mbur_1388
Transfer RNA biogenesis [BR:
mbu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Mbur_1388
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GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ABE52303
UniProt:
Q12W73
LinkDB
All DBs
Position
complement(1478078..1478629)
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AA seq
183 aa
AA seq
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MSRLFIAVDLPSSIRRELIDVLSLFEGFKLKIVSPELIHITLKFLGEVSDDMVPDIASSL
DGIECMPFNANIKGVGVFSNLRSPRVVWLGAEGNFKKLHEEVETSLSKLRFDKDKREFAA
HATLARIKFMPKEQMKGLLYVLDKLKDVDLGEIRVDKVLLKKSTLTPDGPVYETIHEVLL
GQK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagactatttattgcggtggaccttccatcttctatacgtagggagctcattgat
gtcctctctttatttgagggctttaaactaaagattgtttctcctgagctgatccatata
actctgaagttccttggcgaagtttcagatgatatggtgccggatattgcatcttcattg
gatggtattgaatgcatgccatttaatgcgaatatcaaaggagttggtgttttttccaac
ttgcgctctccaagggttgtctggcttggggctgaaggaaatttcaaaaagctccatgag
gaggtggaaaccagtctttcaaagctaaggttcgacaaagataaaagggaattcgctgca
catgcaactctggcacgtataaagttcatgcctaaagaacagatgaaggggcttttatat
gtacttgataagctcaaagatgtggaccttggtgaaattagggtcgataaagttctttta
aagaaaagtactcttactcccgatggtcctgtttatgagacaatacatgaagttttgtta
ggacaaaaataa
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