Methanococcoides burtonii: Mbur_1566
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Entry
Mbur_1566 CDS
T00341
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mbu
Methanococcoides burtonii
Pathway
mbu03022
Basal transcription factors
mbu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mbur_1566
09124 Replication and repair
03420 Nucleotide excision repair
Mbur_1566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbu03021
]
Mbur_1566
03036 Chromosome and associated proteins [BR:
mbu03036
]
Mbur_1566
03400 DNA repair and recombination proteins [BR:
mbu03400
]
Mbur_1566
Enzymes [BR:
mbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mbur_1566
Transcription machinery [BR:
mbu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mbur_1566
Chromosome and associated proteins [BR:
mbu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mbur_1566
DNA repair and recombination proteins [BR:
mbu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mbur_1566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
SLFN-g3_helicase
PhoH
Zot
HBB
nSTAND3
ATPase
AAA_34
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABE52471
UniProt:
Q12VQ5
LinkDB
All DBs
Position
complement(1642563..1644743)
Genome browser
AA seq
726 aa
AA seq
DB search
MSDKPAFMKYFTQSSCYPNQQEAMDRIHSALMQQQLVLFEGACGTGKTLSALVPALHVGK
MLGKTVIIATNVHQQMVQFINEARDIKKVQDVKVAVIKGKTAMCPQEADYEECSVKRENT
FELMETEREIYLKRQELNSARDSYKKSHDPAFVTLRDELSKEIDAVEEKARGLRDRACND
LYEVLRSDSEKFREWLYKEVRSPEEINDHAIKDGMCGYELVKRELKHADLLICNYHHVLN
PDIFSTVLGWIEKEPQETIVIFDEAHNLESAARSHSSLSLTEHSIEKAITELEANLDLLA
DDNIHNLFNIFLEVISDTYNSRFKFGERERVRKNWYDIRISDPYERNDIVRGKFLRQAKG
DFGEKDDIQILLSEASELGAKLDETYRDQYKKGLSSVMKRSHIRYVADFMSAYIELSHNL
NYYPILNVRRDMNDEIYGRVELFTCIPKNVTEPLFNSLFSVILMSATLHPFEMVKKTLGI
TRDTCEMSYGTSFPEEKRLSIAVSIPPLFAKNRDDRHVTELLEQVLLDSIENSKGNVILF
FQSAFEAKRYYSKIEPLVNVPVFLDEVGISSQDVREEFFSIGEENGKAVLLSYLWGTLSE
GIDYRDGRGRTVIIIGVGYPALNDRMNAVESAYDHVFGYGAGWEFAIQVPTIRKIRQAMG
RVVRSPTDYGARILLDGRFLTDSKKRFGKFSVFEVFPPAERSEFVDVDPEKVKYSLMNFF
MDNDEQ
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagcctgcatttatgaaatattttacgcaaagttcatgctatcctaatcaa
caggaagcaatggaccgtattcacagtgcacttatgcagcaacagctagtgctgttcgaa
ggagcatgtgggaccggtaaaacacttagtgcacttgttccggcacttcatgttggtaaa
atgttaggcaagaccgttatcatcgctaccaatgttcatcagcaaatggtacagttcatt
aatgaggcacgtgatataaaaaaggttcaggatgtcaaggtcgcggtcataaaaggcaag
accgcgatgtgcccccaggaagctgattatgaggaatgttctgttaaaagggagaacacc
tttgaactgatggagacggagcgagagatctatcttaaaagacaggaactgaattccgca
cgcgacagttacaaaaagtcccacgacccggcattcgtgacacttagggatgaattgtca
aaagagatcgatgctgtggaagagaaagcaagagggcttcgtgatcgtgcatgcaatgac
ctttatgaggttttacgctccgatagtgagaagttcagagaatggctttacaaagaagta
cgctctcctgaggagatcaatgatcatgctatcaaggatggtatgtgtggttacgagttg
gtgaaaagggagttaaagcatgcagatctgctgatatgtaattaccatcatgttctgaat
ccggatattttctcaacggtgctgggctggattgaaaaagagccccaagagaccattgtt
atttttgatgaggcccataatctcgaatccgctgccagatcccattcgtctttatccctt
accgaacattcaattgaaaaagcaataactgaacttgaggcaaatcttgatcttctggca
gatgacaatattcataatcttttcaatatcttccttgaggtgatctctgatacctacaat
tcaaggttcaagttcggtgaacgtgaacgtgtcagaaagaactggtatgatatacgcata
agcgacccttatgaacgcaatgacattgttcgtggtaagttcctccgtcaggcgaagggg
gattttggtgagaaggatgatatacagatattgctttctgaagcaagtgagcttggtgct
aaactggacgagacatatagggaccaatacaaaaaaggccttagtagtgtcatgaaacgt
tcacatataagatatgttgcggattttatgtcagcttatatcgaactatctcacaatctg
aactactatcccattttgaatgtccgcagggatatgaacgatgagatatatggacgtgtc
gagctttttacatgcatcccgaaaaacgtgaccgaaccgcttttcaattctctgttctca
gtgatcctaatgtcggcaacgcttcatccattcgagatggtgaaaaagacactgggtatc
acgagggatacgtgtgagatgtcctatggtacttctttccctgaagaaaaaaggctttcg
atcgcagtttctattcctcctctctttgccaagaaccgtgatgatcggcatgtaaccgaa
cttctggaacaggtgcttctggattctatcgaaaattcgaagggcaatgttattcttttt
ttccagagtgcatttgaggccaaacggtattattcaaagatcgaaccccttgtcaatgtg
ccggtattccttgatgaggtaggcatatcatcacaggatgtacgggaagagttcttctca
ataggagaggaaaacggcaaagcagtgctgctctcatatctttggggtacgttaagcgaa
ggaattgattatagggacggtcgtggccggactgttatcattataggtgtcggctatcct
gcactcaatgacaggatgaatgcagtggaatcagcgtatgaccatgttttcggctacggt
gcaggctgggagtttgcgatccaggtcccgacgatccgtaagatcagacaggccatgggg
cgtgtggtacgttctccgaccgactatggtgctcgcatccttcttgatgggaggttcctc
acggattcaaagaagaggtttggtaagttctcggtatttgaagtgttcccgccggcagag
aggagtgagttcgtggatgttgatcctgaaaaagtgaagtattctcttatgaacttcttt
atggataatgacgagcagtaa
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