Methanococcoides burtonii: Mbur_1677
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Entry
Mbur_1677 CDS
T00341
Name
(GenBank) CDC48, AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mbu
Methanococcoides burtonii
Pathway
mbu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Mbur_1677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbu03019
]
Mbur_1677
03009 Ribosome biogenesis [BR:
mbu03009
]
Mbur_1677
04131 Membrane trafficking [BR:
mbu04131
]
Mbur_1677
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbu04147
]
Mbur_1677
Messenger RNA biogenesis [BR:
mbu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Mbur_1677
Ribosome biogenesis [BR:
mbu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Mbur_1677
Membrane trafficking [BR:
mbu04131
]
SNARE
SNARE associated proteins
Others
Mbur_1677
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Mbur_1677
Exosome [BR:
mbu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Mbur_1677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
TIP49
AAA_2
AAA_22
AAA_14
nSTAND3
AAA_5
AAA_33
NPHP3_N
AAA_28
Mg_chelatase
ATPase_2
RNA_helicase
IstB_IS21
AAA_7
AAA_18
AAA_24
DUF815
Sigma54_activat
Parvo_NS1
AAA_25
ATP-synt_ab
AAA_19
ABC_tran
AAA_17
AAA_3
Zeta_toxin
AAA_lid_PRS2_C
AAA_30
PhoH
NB-ARC
DUF5906
Sigma54_activ_2
KAP_NTPase
VASP_tetra
Motif
Other DBs
NCBI-ProteinID:
ABE52571
UniProt:
Q12VF5
LinkDB
All DBs
Position
1755578..1757788
Genome browser
AA seq
736 aa
AA seq
DB search
MSEDITVRVAEANHRDAGRGIARLPNALMQTIDARSGDIIEIRNKKNTYARVYPAGLDDE
GKNIIRIDGNLRGNARVGIDDPVTVKRILEKDAEKITLAPTHPVLNERISRSVHLSLEGR
PVDKGQRIRVENINNPLIFVVKATKPHGPVVVTRTTKIEIVEPIAETDMGEEVSYEDIGG
LKRELGLMREMIELPLRHPELFDKLGVDPPKGVLLYGPPGTGKTMIAKAVASESEANFIP
ISGPEIISKYYGESEQKLREIFEEAEKEGPTIIFIDELDSIAPKRDDVVGEVERRVVAQL
LTLMDGLTSRGKVIVIAATNRPNSIDQALRRGGRFDREIEIGIPDRGGRLQVLYVHTRGM
PIEQGLNLENIADITHGFVGADLASLCKEAAMHALRRMLPLISIEEEIPPEIMETLEVTE
TDFIEAHRNIEPSALREVFVEIPHVRWEDIGGLNKVKQELIEAVEWPLKYPEMFTALNTT
PPRGILLFGPPGTGKTLLAKAVANESEANFISIKGPELLSKYVGESEKAVRETFRKAKQA
APTVVFFDELDSMVPKRGMGSDQQATERVVSQILTEIDGIEELKDIVIVAATNRPDIIDP
ALLRPGRFDRLIYVRPPDKEERAKILDIHLSGKPIAEDVKLEELAELTEGYVGADIEAIC
REAAMMTLREIIRPGMTKDEVYETVKNVVIQRSHFSTAIKRVRASTSLDEMKRYDETARM
FSNPDADENKDLREKA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagatatcacagtacgtgttgcagaagcaaaccaccgtgatgcgggaaggggt
attgcccgacttccaaatgcccttatgcagaccatcgatgcaagaagcggagatataatc
gagatcaggaacaagaaaaatacctacgcaagggtatatccggcaggtctggatgatgaa
gggaagaatattatacgtatcgacgggaatcttcgaggcaatgcaagagtcggtatcgat
gacccggtgactgtaaaacggatacttgagaaagatgctgaaaagataactctcgcccca
acacaccctgttctgaacgaaaggatatcacgttccgtacatcttagcttagagggaaga
cctgtcgataaaggacagcgcattcgtgtggagaacataaataacccgcttatttttgta
gtaaaggctaccaaaccccatggcccggtagtggtcacacgaactaccaaaattgagatc
gttgaacccattgctgaaacagatatgggagaggaagtatcttatgaagatattggcggg
ctgaagcgagaactcgggctgatgcgcgagatgatcgaactgccactgagacatcctgaa
cttttcgacaagcttggagttgatcctccaaaaggagttttgctttacggaccgccaggc
acaggaaagacgatgatagccaaagctgtggcaagtgaaagtgaggcgaatttcataccc
ataagcgggccggaaataatttcaaaatattacggcgaaagtgagcaaaagcttcgcgag
atctttgaggaagctgaaaaggaaggacctacaataatattcatcgatgagttagattcc
attgcaccaaaaagagatgatgttgtaggtgaagtcgaaaggagggttgtggcccaactg
cttacattgatggatggattaacgagccggggaaaggtcatagtcattgctgcaaccaat
aggccaaattccattgaccaggcactgcgccgaggggggcgttttgacagggaaatagag
atagggatacccgacagaggaggacggttgcaggtattgtacgtccacacccgagggatg
cccatagaacagggacttaacctcgaaaacattgcggacatcacccacggatttgtcgga
gccgaccttgcctccctttgcaaggaagccgcaatgcatgccctgcgcaggatgctcccc
ctgataagtatcgaagaggagatcccgcctgaaataatggaaacgcttgaggtgactgaa
accgatttcatagaggcgcatcgcaatattgaaccttctgctttaagggaggtctttgtg
gagataccccacgtgaggtgggaagatattggcggcctcaataaagtgaaacaggaactg
atagaagcagttgaatggcctcttaaatatcccgagatgttcactgccctgaacaccaca
ccaccaaggggaatccttctattcggaccccccggcacaggtaagacccttttggcaaaa
gcagttgcaaatgaaagtgaggcaaatttcattagtatcaaaggaccggaacttctcagt
aaatatgttggggaatctgaaaaagcggtaagggaaacgtttagaaaagccaagcaagca
gctccaaccgttgttttctttgatgagcttgattcaatggtgccaaagcgcgggatggga
tccgaccagcaagcaacagaacgcgttgtcagccagatattgaccgaaatagacggcatt
gaggaactgaaggatatagtcatagtggctgccactaacaggccggacataatcgacccc
gccctattaagaccggggcgttttgacagacttatctatgtaaggccccctgataaagag
gagcgtgccaagatacttgatattcatctttcaggtaagcctattgcagaagatgtaaaa
ctggaagaacttgctgaacttaccgaagggtatgtaggagcggatattgaagccatctgc
agagaagctgcaatgatgacacttcgagagatcatcaggccaggaatgacaaaggatgag
gtctatgaaactgtaaagaacgttgtcattcaaagatcacactttagcacagcgataaaa
agagtgagagcttcgacatccctggatgaaatgaagagatatgacgaaacggcacgaatg
ttctcgaatccggatgcagatgagaacaaggacttaagggaaaaggcataa
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