Mycobacterium burgundiense: MU0053_000317
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Entry
MU0053_000317 CDS
T10823
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbug Mycobacterium burgundiense
Brite
KEGG Orthology (KO) [BR:
mbug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbug03032
]
MU0053_000317 (topA)
03400 DNA repair and recombination proteins [BR:
mbug03400
]
MU0053_000317 (topA)
Enzymes [BR:
mbug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MU0053_000317 (topA)
DNA replication proteins [BR:
mbug03032
]
Prokaryotic type
DNA Topoisomerases
MU0053_000317 (topA)
DNA repair and recombination proteins [BR:
mbug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MU0053_000317 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CAJ1495239
LinkDB
All DBs
Position
1:336623..339439
Genome browser
AA seq
938 aa
AA seq
DB search
MAGDNGKAGVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDLPRAAADVPAKYKSEP
WARLGVNVDADFEPLYIVSPEKKATVTELKGLLKDVDELYLATDGDREGEAIAWHLLETL
KPRIPVKRMVFHEITEPAIRAAAENPRELDIDLVDAQETRRILDRLYGYEVSPVLWKKVA
PKLSAGRVQSVATRIIVQRERERMAFRSATYWDIVAELDASVSDPNAHPPVFNARLVNVD
GQRVATGRDFDSLGTVKKPTEVVVLDEAGAGNLVEGLSGASLAVSSVEEKPYTRRPYPPF
MTSTLQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSASAINAARNQAAQLYG
EESVYPTARQYTRKVKNAQEAHEAIRPAGDTFATPDAVRRELESDEFRLYELIWQRTVAS
QMADARGTTLSLRITGESAGTDGVGRAVTFAASGRTLTFPGFLKAYVETVDELAGGEADD
AERRLPNLTQGQQVRAQKLTPDGHATNPPARYTEASLIKALEELGIGRPSTYSSIIKTIQ
DRGYVHKKGSALVPSWVAFAVIGLLEQHFARLVDYDFTAAMEDELDGIAAGTEQRSNWLS
NFYFGGEDGVEGSIARSGGLKKLVGGNLEGIDAREVNSIKLFDDEEGRAVNVRVGRNGAY
LERMVLGEDGELTPQRANLNDELTPDELTLELAEKLFATPQGGRSLGIDPATGHEIVAKD
GRFGPYVTEVLPEPETPDDDGTAGTPAKKGKKPTGPKPRTGSLLRSMDLETVTLEDALRL
LSLPRVVGVDPASGEEITAQNGRYGPYLKRGTDSRSLATEEQMFTIDLDEALKIYAEPKR
RGRQGAATPPLRELGVDPVSEKPMVIKDGRFGPYVTDGETNASLRKGDDVLSITDERASE
LLADRRARGPVKKKAAAKKAPAKKAAKKAPAKKAAKKA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
ttggctggcgataacggcaaagcaggcgtccggcgactcgtcatcgtcgagtcgccgacc
aaggcgcgcaagatcgcgggctacctcggctccaactacattgtcgagtcctcccgcggc
cacatccgtgacctgccgcgcgccgccgccgacgtgccggccaagtacaaatccgagccg
tgggcccgactcggggtcaacgtggacgccgacttcgagccgctctacatcgtcagcccc
gagaagaaggccaccgtcaccgagctcaagggcctgctcaaggacgtcgacgagctctac
ctcgcgacggacggtgaccgcgagggtgaggccatcgcctggcacctgctcgagacgctc
aagccccgcatcccggtcaaacggatggtgttccacgagatcaccgagccggcgatccgc
gccgccgccgaaaacccgcgcgaactggacatcgatctggtcgacgcccaggagacccgg
cgcatcctggaccggctctacggctacgaggtctcgcccgtgctgtggaagaaggtggcg
ccgaagctgagcgccggccgcgtccagtcggtcgccacgcgcatcatcgtgcagcgcgaa
cgcgagcggatggcgttccgcagcgccacctactgggacatcgtcgccgaactcgacgcc
agcgtgtccgatccgaacgcgcatccgccggtgttcaacgcgcggctggtcaacgtcgac
ggtcagcgcgtggccaccggccgcgacttcgactcgctgggcaccgtcaagaagcccacc
gaggtggtggtgctcgacgaggccggtgccggcaacctggtggagggcctcagcggtgcc
tccctggcggtctcctcggtcgaggagaagccctacacccgccggccgtacccgccgttc
atgacctccacgctgcagcaggaggccggccgcaagctgcgcttctcctccgagcggacc
atgagcatcgcgcagcgcctctacgaaaacggctacatcacctacatgcgtaccgactcg
acgacgctgtcggcgtcggcgatcaacgccgcgcgcaaccaggccgcccagctctacggc
gaggaatccgtctacccgacggcgcggcagtacacccgcaaggtcaagaacgcgcaggag
gcccacgaggcgatccggcccgccggcgacaccttcgccacccccgacgcggtgcgtcgc
gaactcgaatccgacgagttccggctctacgagctgatctggcagcgcacggtcgcctcg
cagatggccgatgcccggggcaccacgctgagcctgcggatcaccggcgaatccgccggc
accgacggcgtcggccgcgccgtcaccttcgcggccagcggccggaccctgaccttcccg
ggtttcttgaaggcctacgtcgagaccgtcgacgaactcgccggcggtgaggccgacgac
gccgagcggcggctgccgaacctcacgcagggccagcaggtccgggcgcagaagctgacg
ccggacggccacgccaccaacccgccggcccgctacaccgaggcctcgctgatcaaggcg
ctcgaagagctcggcatcggtcgcccgtcgacctattcgtcgatcatcaagacgatccag
gaccgcggctacgtgcacaagaagggcagcgccttggtgccgtcctgggtggcgttcgcc
gtgatcgggctgctggaacagcatttcgcgcggctggtcgactatgacttcaccgcggcc
atggaagacgagctcgacggcatcgccgcgggcaccgagcagcgcagcaactggctgtcc
aacttctacttcggcggcgaggacggcgtcgaggggtcgatcgcgcggtccggcggcctc
aagaagctggtgggtggcaacctcgaaggcatcgacgcgcgagaagtcaactcgatcaag
ctctttgacgacgaagagggccgggccgtcaacgtccgggtcggccgcaacggcgcctac
ctggagcggatggtcctcggcgaggacggtgagctgaccccgcagcgggccaacctcaac
gacgaactgacccccgacgagttgaccctcgaattggcggagaagctgttcgccaccccg
cagggcggccgcagcctcggcatcgatcccgccaccggccacgaaatcgtggccaaggac
gggcgtttcggcccctacgtcaccgaggtgctgcccgagccggaaacccccgacgacgac
ggcaccgccggaacgccggcgaagaagggcaagaagccgacgggtcccaagccgcgcacc
ggttcgctgctgcgcagcatggacctggagaccgtgaccctcgaggacgcgctgcggctg
ctgtcgctgccacgggtggtcggggtggacccggcctccggcgaggagatcaccgcgcag
aacggtcgttacggcccatatctgaagcgcggcaccgactctcgctcgctggccaccgag
gagcagatgttcaccatcgacctcgacgaggcgctgaagatctacgccgagccgaaacgg
cggggccgccagggcgccgccacgccgccgctgcgggagttgggtgtcgacccggtgtcg
gagaagccgatggtgatcaaggacggccgcttcggcccgtatgtcaccgacggtgaaacc
aacgcgagcctgcgcaagggtgacgacgtgctgtcgatcaccgacgagcgggcctcggag
ttgttggccgaccggcgcgcgcgaggcccggtgaagaagaaggccgccgccaagaaggcg
ccggccaagaaggccgcgaagaaggccccggccaagaaggccgcgaagaaggcttag
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