Mycobacterium burgundiense: MU0053_000451
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Entry
MU0053_000451 CDS
T10823
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mbug Mycobacterium burgundiense
Pathway
mbug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MU0053_000451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbug03019
]
MU0053_000451
03400 DNA repair and recombination proteins [BR:
mbug03400
]
MU0053_000451
Enzymes [BR:
mbug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MU0053_000451
Messenger RNA biogenesis [BR:
mbug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MU0053_000451
DNA repair and recombination proteins [BR:
mbug03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MU0053_000451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
KORA
UPRTase
Motif
Other DBs
NCBI-ProteinID:
CAJ1495654
LinkDB
All DBs
Position
1:512058..514133
Genome browser
AA seq
691 aa
AA seq
DB search
MATREQAQSILEQLAGPGATLRDDQWVAIEALVVHRRQALVVQRTGWGKSAVYFIAAKLL
RATGHGPTVIVSPLLALMRNQVEAAERAGVRAATINSGNVTEWETIHQRVADGALDVLLV
SPERLNNPDFRENVLPALAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIGELGSNIPV
LATTATANDRVVTDVAAQLGVGGRDTLVLRGGLDRQSLRLSVVRVGNPAQRAAWLAAQLD
SLPGSGIIYTLTVAQAQDVAALLRDQGHPVAAYTGATDTTEREQLEADLLANRVKALVAT
SALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATDSAEVILLPGTEDQDVWRYFAS
VAFPSEAMVRHVIGALDADRPQSTAALEPQVDLNRSRLEMVLKVLDVDGAVRRVKGGWIG
TGQPWEYDEDRYRALEQARNREQQAMLDYQSTDGCRMVFLRSQLDDPDLQPGERCGRCDN
CTGARFETAVDEATLAATRERLRRPGVDITPRKQWPSGLASLGLELKGRIADGAQPGRAI
GRLTDLGWGARLRKLLAEPDAEVPDEVIGAAIEVLKVWDWKTRPVAVLGLDSETHPLLIS
STVRRLAEVGRLTNLGTLRYAPQRRPVTAANSAYRVAALDGAWERPEISADGPVLLVDDL
VDTGWTMTMAAQLLRSAGAPEVLPFALASVS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgcgagcaggcgcagtcgatcctcgaacaactggccggaccgggcgccacc
ctgcgcgatgaccagtgggtggcgatcgaggctctggtggtgcatcggcgtcaggcactg
gtggtgcagcgcaccggctggggcaaatcggcggtgtacttcattgccgccaagctgctg
cgcgccaccgggcacggccccaccgtgatcgtctccccgctgctcgccctgatgcgcaat
caggtcgaggcggccgagcgggcgggggtgcgcgcggcgacgatcaactccggcaacgtc
accgaatgggagacgatccaccagcgggtcgccgacggtgccctcgatgtcctgctggtc
agcccggaacggttgaacaaccccgactttcgggagaatgtgctgccggcgttggccgcc
gacgcgggactggtggtggtcgatgaggcgcactgcgtctccgactggggtcatgacttc
cggcccgactaccggcgcatccgcacgctgatcggcgaactcggttccaacatcccggtt
ctggcgacgacggccaccgccaatgatcgcgtggtcaccgatgtcgcggcccagctgggg
gtcggtggacgcgacaccctggtgctacggggcgggctggaccgccagtcgctgcggctt
tcggtggtccgggtgggcaacccggcccaacgtgcggcatggcttgccgcacagttggat
tcgctgccgggctccggcatcatctacaccctgacggtggcgcaggcccaggacgtcgcc
gccctgctgcgggatcagggccacccggtcgcggcctacaccggggccaccgacaccacc
gaacgtgaacaactcgaggccgacctgctcgcgaaccgggtcaaggcgctggtcgccacg
tcggcgctggggatgggtttcgacaagcccgacctgggtttcgtcgttcatctgggcgcg
ccgtcctcgccgatcgcctattaccagcaggtcggccgcgccggccgtgcgaccgacagc
gccgaggtgatcctgttgccgggcaccgaggatcaggacgtgtggcggtacttcgcgtcc
gtggcattcccgtcggaggcgatggtgcgccacgttatcggggccttggacgccgatcgg
ccgcagtcgacggcggcgctggaaccgcaggtcgatctgaaccggtctcggctcgaaatg
gtgctcaaggtgctcgatgtcgacggggcggtgcgtcgcgtcaagggcggctggatcggc
accggacaaccgtgggagtacgacgaggaccgctaccgggccctcgagcaggcgcgcaac
cgggaacaacaggccatgctggactatcagagcaccgacggctgccgaatggtgttcctg
cgcagccaactcgacgatccggacctacagcccggcgagcggtgcggacgctgcgacaac
tgcaccggtgctcgctttgaaaccgccgtcgacgaggcgacgctggccgccacccgggag
cggttacgtcgccccggcgtcgacatcaccccccgcaagcagtggccgtccggtttggcc
tcgctgggattggagctgaagggccggatcgccgacggcgcccagccgggccgcgccatc
ggccggctcaccgacctcggttggggtgcccggctgcggaagttgctggccgaacccgat
gccgaggtgcccgacgaggtgatcggcgcggcgatcgaggtgctcaaggtctgggattgg
aaaaccaggccggtcgcagtgctgggtctggactccgagacccacccgctgctgatttcg
tccacggtccggcggctcgccgaggtcgggcggctgaccaacctcggcaccctgcggtac
gcgccgcagcgtcgcccggtcaccgcggcgaattccgcgtaccgggtggccgcgctcgac
ggggcctgggagcgccccgagatcagcgccgacggtccggtgctgctggtcgacgatctg
gtcgacacgggatggacgatgaccatggcggcccagctgttgcgcagtgccggcgccccc
gaggtgctgccgttcgcgctggccagcgtcagctga
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integrated database retrieval system
