Mycobacterium burgundiense: MU0053_001185
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Entry
MU0053_001185 CDS
T10823
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mbug Mycobacterium burgundiense
Pathway
mbug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MU0053_001185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbug03019
]
MU0053_001185
03009 Ribosome biogenesis [BR:
mbug03009
]
MU0053_001185
Enzymes [BR:
mbug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MU0053_001185
Messenger RNA biogenesis [BR:
mbug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MU0053_001185
Ribosome biogenesis [BR:
mbug03009
]
Prokaryotic type
rRNA helicases
MU0053_001185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
UvrA_inter
CMS1
P-loop_SecA
Flavi_DEAD
HEM4
Motif
Other DBs
NCBI-ProteinID:
CAJ1498545
UniProt:
A0ABM9LG63
LinkDB
All DBs
Position
1:1251844..1253604
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AA seq
586 aa
AA seq
DB search
MTTEDPDQSDQPALTFADLQIHPAVLQAVSDVGYETPSAVQTATIPALLAGSDVVGMAQT
GTGKTAAFAIPILSKIDVTKKHTQALVLAPTRELALQVAEAFSRYGAQLPQINVLAIYGG
SSYTPQLAGLRRGAHVVVGTPGRVIDHLERGTLDLSHLDYLVLDEADEMLQMGFAEDVER
ILVDTPEYKQVALFSATMPAAIRKITTKYLHDPVEVTVKAKTATAENITQRYIQVSGHRK
MDALTRILEVEPFEAMIVFVRTKQATEEVAERLRARGFSAAAINGDIAQHQRERTIASLK
DGSIDILVATDVAARGLDVERISHVLNYDVPHDTESYVHRIGRTGRAGRSGTAVLFVSPR
ERHMLKSIEKATRSKLVEVELPTVDDVNAQRVAKFRDSISDALGAPGFELFRRLIEDYER
ESDVSMADIAAALALQTRKGEEFLMSEPPPDKRRERPDRPDRPDRGDRPTRRSSGSFASY
RIDVGKRHKVMPGAIVGAIANEGGLSRSDFGHIAIMPDFSLVELPPNLPPETLKALEKTR
IQGVLINLQPDPGGAGTRDGGGKKPYRGGDKKPYQGSKKPHKHRKP
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgaagacccggaccagtccgatcaacctgccttgacgtttgccgacctgcaa
atccaccccgccgtgctgcaggcggtgtccgacgtcggctacgaaacgccctcggcggtc
cagaccgcgaccatcccggcgctgctggccggctccgacgtggtggggatggcgcagacc
gggaccggcaagaccgccgcgttcgccatcccgatcctgtccaagatcgacgtcaccaag
aagcacacccaggcgctggtgctcgcgcccacccgcgaattggcgttgcaggtcgccgag
gcgttcagccggtacggggcgcaactgccgcagatcaacgtgctggccatctacggtggt
tcgtcctacaccccgcaactcgccgggttgcgccgcggcgcccacgtcgtggtcggcact
cccggccgggtcatcgaccatctggaacgcggcaccctggatctgtcgcatctggactat
ctggtgctcgatgaggccgacgagatgctgcagatgggcttcgccgaggacgtcgaacgc
atcttggtcgacacccccgagtacaagcaggtcgcgctgttctcggcgaccatgcccgcg
gccatccgcaagatcaccaccaagtacctgcacgacccggtcgaggtcacggtcaaggcg
aaaaccgcgacggccgagaacatcacgcagcgctacatccaggtgtccgggcaccgcaag
atggacgcgctgaccaggatcctcgaggtcgaaccgttcgaggcgatgatcgtgttcgtg
cgtaccaagcaggccaccgaggaggtcgccgagcggctgcgggcgcgcggattctccgcg
gccgccatcaacggtgacatcgcgcagcaccagcgcgagcgcaccatcgcgtccctgaag
gacggcagcatcgacatcttggtcgccaccgacgtggccgcccgcggattggacgtcgag
cggatctcgcacgtgctgaactacgacgtcccgcacgacaccgagtcctacgtgcaccgg
atcggtcgcaccggccgggccggaagatccggcaccgcagtacttttcgtctcaccgcgc
gagcgccacatgctcaagtcgatcgagaaggccacccggtccaagctcgtcgaggtggag
ctgccgaccgtcgacgatgtcaacgcgcagcgggtggcgaagttccgcgattccatcagc
gatgcgctcggcgcccccggcttcgaactgttccgccggctgatcgaggactacgaacgc
gagagcgatgtgtcgatggccgacatcgcggccgcgctggcgttgcagacccgcaagggc
gaagagttcctgatgtccgagccgccgccggacaagcgccgcgaacgcccggaccggccg
gatcgcccggaccgcggcgaccggccgacgcgccggtccagcggctcgttcgcgtcctac
cggatcgatgtcgggaagcggcacaaggtgatgcccggggcgatcgtcggcgcgatcgcg
aacgagggcggcctgagtcgcagtgacttcgggcacatcgcgatcatgcccgacttctcg
ttggtcgaactgccgccgaacctgccgcccgagacgctcaaggcgttggagaagacccga
atccagggcgtgttgatcaacctccagcccgatcccggcggtgccgggacgcgcgacggc
ggcggtaagaagccgtatcggggcggtgacaagaagccttaccagggcagcaagaagccg
cacaagcaccgaaagccgtaa
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integrated database retrieval system
