Mycobacterium burgundiense: MU0053_001286
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Entry
MU0053_001286 CDS
T10823
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mbug Mycobacterium burgundiense
Pathway
mbug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MU0053_001286 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbug03021
]
MU0053_001286 (rho)
03019 Messenger RNA biogenesis [BR:
mbug03019
]
MU0053_001286 (rho)
Transcription machinery [BR:
mbug03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MU0053_001286 (rho)
Messenger RNA biogenesis [BR:
mbug03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MU0053_001286 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
S1CSD-TOTE-2
AAA_22
CoV_NSP2_C
Motif
Other DBs
NCBI-ProteinID:
CAJ1498947
LinkDB
All DBs
Position
1:1351348..1353459
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AA seq
703 aa
AA seq
DB search
MTDTDLITAGDATSKADLPQAVNSDPPAAAAKAPAKEANSLASMVLPELRALAAKVGVKG
TSGMRKGDLIAAIRERQSAGDSAPSNDSPEPKQGASAGQARKAGDKAAAKDAQAADASTP
AATEPKAEAAPAAPAEDAGQRSETPRRERRGASRDSGAPAAEKPAKAVQTDSAGAGAEDG
ATAGREDTRQDRGSEQQNRRGEQNRGDQNRSDQQNRGGDQQNRGDQNRGEQNRGGDQQNR
GEQNRGGDQQNRGNQNRGDQQNRGDQQSRGDQNRGGNADNSDDDDDSRHGRRGRRFRDRR
RRGERSGEGGGETELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNG
LRRGDAVTGAVRVPREGESNDKNPRQKFNPLVRLDSVNGGPVDAAKNRPEFGKLTPLYPN
QRLRLETAPEKLTTRVIDLIMPIGKGQRALIVSPPKAGKTTIMQDIANAITRNNPECHLM
VVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTQAAELAIERAKRLVEQGKDVVVLLD
SITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTIVATAMVETGS
TGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLGADEFAIVHKLRR
VLSGLDSHQAIDLLMSQLRKTKTNYEFLVQVSKTAPKSPEDMD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcattacggctggggacgccacctcgaaggcggatctgccccag
gctgtgaactccgaccctcccgccgccgccgcaaaggccccggccaaggaagcaaactca
ctggccagcatggtgttgccggagctacgtgcgctggccgccaaggtaggtgtcaaaggc
acctccggaatgcgcaagggcgatttgatcgccgcgatccgcgaacgccagtcggcgggc
gacagcgccccctccaacgacagccctgagcccaaacagggcgccagcgccggccaggcc
cgtaaggccggcgacaaggccgctgccaaagacgcccaggctgcggatgcgtccacgcct
gccgccaccgagccgaaggccgaagccgccccggcggcgcccgccgaagacgccggccag
cgcagcgagaccccgcgccgtgagcgccggggcgcttcccgtgactccggcgctccggcc
gctgagaagcccgccaaggcggtgcagaccgattccgctggtgccggtgccgaagacggc
gcaaccgccggccgcgaggacaccaggcaggaccgcgggagcgagcagcagaaccgccgc
ggcgagcagaaccgtggcgaccagaaccgcagtgaccagcagaaccgcggtggtgaccag
cagaaccgtggcgaccagaaccgcggcgagcagaaccgcggtggtgaccagcagaaccgt
ggcgagcagaaccgcggtggtgaccagcagaaccgcggcaaccagaaccgcggggatcag
cagaaccgtggggatcagcaaagccgcggcgaccagaaccgcggcggcaacgccgacaac
tccgatgatgacgacgacagccggcacggtcggcgcggacgtcgtttccgtgaccgtcgg
cgccgcggcgagcgttccggtgagggcggcggcgagaccgaactgcgcgaggatgacgtc
gtacagccggtcgcgggcatcctcgacgtgctggacaactacgcgttcgtccggacctcg
ggctacctggccggacccaacgacgtctacgtctcgatgaacatggtgcgcaagaacggt
ctgcgccgcggcgacgccgtcaccggcgcggtgcgggtgccccgggagggcgagagcaac
gacaagaatccgcgccagaagttcaacccgctggtccggttggacagcgtcaacggcgga
cccgtcgatgcggcgaagaaccgtcccgagttcggcaagctgaccccgctgtacccgaat
cagcggctgcgcctcgagaccgccccggagaagctgaccactcgggtcatcgacctgatc
atgccgatcggtaagggtcagcgcgccctgatcgtgtccccgcccaaggccggtaagacg
acgatcatgcaggacatcgccaacgcgatcacccgcaacaaccccgagtgccatctgatg
gtcgtccttgtcgacgagcggccggaagaggtcaccgacatgcagcgctcggtcaagggc
gaggtcattgcctcgaccttcgaccgtccgccgtccgatcacacccaggcggccgagctg
gccatcgagcgcgccaagcgcctggtggagcagggcaaagacgttgtggtgctgctggac
tccatcacgcgcctcggtcgtgcgtacaacaacgcatcgccggcctcgggccgaatcctg
tccggtggcgtggactccaccgcgctctacccacccaagcgtttcctgggtgcggcccgc
aacatcgaagagggtggctcgttgaccatcgtcgccaccgcgatggtggagaccggttcg
accggtgacacggtcatcttcgaggagttcaagggcaccggcaacgcggaactgaagctg
gaccgcaagatcgccgaacgccgggtgttccccgcggtcgacgtcaatccgtccggtacg
cgtaaggacgaattgctgctcggcgccgacgagttcgccatcgtgcacaagttgcgtcgg
gtgctgtcggggctggattcgcatcaggcgatcgacctgttgatgagccagttgcgcaag
accaagaccaactacgagttcctggttcaggtctccaagacggctccgaagtcgccggaa
gacatggactga
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