Mycobacterium burgundiense: MU0053_003855
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Entry
MU0053_003855 CDS
T10823
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mbug Mycobacterium burgundiense
Pathway
mbug03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbug00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MU0053_003855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbug03021
]
MU0053_003855
03400 DNA repair and recombination proteins [BR:
mbug03400
]
MU0053_003855
Enzymes [BR:
mbug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MU0053_003855
Transcription machinery [BR:
mbug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MU0053_003855
DNA repair and recombination proteins [BR:
mbug03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MU0053_003855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
CAJ1508462
LinkDB
All DBs
Position
1:complement(4064725..4068684)
Genome browser
AA seq
1319 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDDEMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
MKELEDEGAKSDVKRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDENL
YRELVDRYGEYFTGAMGAESIKKLIETFDIDAEAESLRDTIRNGKGQKKLRALKRLKVVA
AFQTNRNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYFLTTEIPGDTGEYA
PAAKDQVEFGVYSSPAEAIMALDRGALSVRARIKVRLTQQRPPADIEADLFGAEGWQPGD
AWTAETTLGRVMFNELLPISYPFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDAG
FHWATRSGVTVSMADVLVPPQKEEILDRYEKEADGIEKKYQRGALNHGERNEALVKIWQE
ATDEVGKALEAYYPDDNPIITIVKSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREADCGTERGITVT
IAELQAGSEALIRDPHVETSAYARTLAADAVDEKGNVIVERGHDLGDPAIDALLAAGITS
VKVRSVLTCTTGTGVCAYCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGG
TTGGTDIVGGLPRVQELFEARVPRNRAPIADVSGRVRLEESDKFYTITIVPDDGGEEVVY
DKLSRRQRLRVYKHEDGSERLLADGDHVEVGQQLMEGSADPHEVLRVMGPREVQVHLVGE
VQDVYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERSEFESENRRVVTEG
GEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKL
IPAGTGINRYRNIAVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgtattggcctcgccaccgcggacgacatc
cgtaattggtccttcggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccagagaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcgccg
gtcacccacatctggtacttcaagggtgtgccgagccggttgggctatctgctcgacctg
gcgcccaaggatctggaaaagatcatctacttcgcggcctacgtgatcacgtcggtcgac
gacgagatgcgccacaacgagctgtccacgctcgaggccgagatggtcgtcgagaagaag
gccgtcgaggatcagcgcgacgccgacctggaggcccgggcgcagaagctcgaggccgac
atgaaggaactcgaggacgagggcgccaagtccgacgtcaagcgcaaggtgcgcgacggc
ggcgagcgcgagatgcgtcagctccgggaccgggcccagcgcgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtcgacgagaacctg
taccgggaactcgtggaccgctacggcgagtacttcaccggcgccatgggtgccgagtcg
atcaagaagctcatcgagaccttcgacatcgacgccgaggccgagtcgctgcgcgacacg
atccgcaacggcaagggtcagaagaagctgcgcgccctcaagcgcctcaaggtggttgcg
gcgttccagaccaaccgcaactcgccgatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgtccgatggtccagctcgacggtggccgcttcgccacctccgacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgtctcaagaggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ctgttcgacaacggccgtcgcggccgtccggtcaccgggccgggcaaccgtccgctgaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgctcggtcatcgtggtcggcccgcagctcaagctgcatcag
tgcgggctgcccaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcggatggtggaacgtcagcgt
ccgcaggtgtgggatgtcctcgaagaggtcatcggtgagcacccggtgctgctgaaccgg
gcgccgacgttgcaccgcctcggcatccaggccttcgagccgcagctggtggagggcaag
gccatccagctgcacccgctggtctgcgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcaccttccgctgagcgcggaggcgcaggccgaggcccgcatcctgatgctg
tcgtcgaacaacatcctgtcgccggcatcgggtcgtccgttggccatgccccgactggac
atggtgaccggtctgtacttcctgaccaccgagattcccggggacaccggcgaatacgcc
ccggcggccaaggatcaggtggagttcggtgtctacagctcgccggccgaggccatcatg
gccctggaccgcggcgcgttgagcgtccgggcgcggatcaaggtgcggctgacgcaacag
cgtccgccggccgacatcgaggccgacctgttcggagccgagggctggcagccgggtgat
gcctggaccgcggagaccacgctgggtcgcgtcatgttcaacgaactgctgccgatcagc
tatccgttcgtcaacaagcagatgcacaagaaggtgcaggcggcgatcatcaacgatctc
gccgagcgctaccccatgatcgtggtcgcacagaccgtcgacaagctgaaggacgccggt
ttccattgggcgacccgaagcggggtcacggtctcgatggccgacgtgttggtgccgccg
cagaaggaagagatcctcgaccggtacgagaaggaagccgacgggatcgagaagaagtac
cagcgcggcgcgctcaaccacggtgagcgcaacgaggccctggtcaagatctggcaggag
gccaccgacgaggtcggtaaggcgctcgaggcgtactacccggacgacaacccgatcatc
acgatcgtgaagtccggcgccacgggcaacttcacccagacccggacgctggccggcatg
aagggtctggtgaccaacccgaagggtgagttcatcccgcgtcccatcaagtcctcgttc
cgcgagggcctgacggtgctggagtacttcatcaacacccacggtgcccgtaagggtctg
gccgacaccgcgttgcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtc
agccaggacgtcatcgtccgcgaggccgactgcggtaccgagcgtggcatcacggtgacc
atcgccgagttgcaggccggatccgaggccctgattcgcgatccgcacgtggagaccagt
gcgtatgcccgcaccctggccgccgacgcggtcgacgagaagggcaacgtgatcgtcgag
cgcgggcacgacctgggcgacccggcgatcgacgcactgttggccgcggggatcacctcg
gtcaaggtgcgttcggtactgacctgcaccaccggtaccggggtgtgcgcgtactgctac
ggccgttcgatggccaccggcaagctggtcgacatcggcgaggccgtcggcatcgtcgcg
gcccagtccatcggtgagcccggcacgcagctgaccatgcgtaccttccaccagggtggc
accaccggcggcaccgacatcgtcggtggtctgccgcgggtgcaggagctgttcgaggcg
cgcgttccgcgtaaccgcgccccgatcgccgacgtgtccgggcgggttcgcctggaggag
agcgacaagttctacacgatcacaatcgtgccggatgacggcggcgaggaagtggtctac
gacaagctctcccgtcgtcagcgcctgcgggtgtacaagcacgaggacggctccgagcgg
ctcctggccgacggtgaccacgtcgaggtgggccagcagctgatggaaggctcggccgac
ccgcacgaggtgctgcgcgtcatgggtccgcgcgaggtgcaggtgcacctcgtcggcgag
gtgcaggacgtctaccgcgctcagggtgtgtcgatccacgacaagcacatcgaggtgatc
gtgcgccagatgctgcgtcgggtcaccatcatcgattcgggtgccacggagttcctgccc
gggtcgctgaccgagcgcagcgagttcgagtccgagaaccggcgggtggtgaccgagggc
ggcgagcccgcggcgggccgcccggtgctgatgggcatcacgaaggcctcgctggccacc
gattcgtggttgtcggcggcgtccttccaggagaccacccgcgtgctgaccgatgcggcg
atcaactgccgcagcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctg
atcccggccggaaccggcatcaaccggtaccgcaacatcgcggtccagccgaccgaggag
gcccgcgccgcggcgtacacgatcccgtcctacgaggatcagtactacagcccggacttc
ggtcaggcgaccggagccgcggtaccgctcgacgattacgggtacagcgactaccggtag
DBGET
integrated database retrieval system
