Methylotuvimicrobium buryatense: EQU24_01750
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Entry
EQU24_01750 CDS
T05995
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mbur
Methylotuvimicrobium buryatense
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbur03016
]
EQU24_01750
Enzymes [BR:
mbur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EQU24_01750
Transfer RNA biogenesis [BR:
mbur03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EQU24_01750
Prokaryotic type
tRNA splicing ligases
EQU24_01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QCW81118
UniProt:
A0A4P9UJ81
LinkDB
All DBs
Position
complement(369227..370657)
Genome browser
AA seq
476 aa
AA seq
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MDLKQFIQRDETCWEIPAKGAMRVPAIIYADASLLQAMDQKVHEQICNVAALPGIVEAAY
AMPDAHWGYGFPIGGVGAFDADQGGVISAGGVGFDISCGVRTLHTGLTMNDLQGVKKDLA
DELYRTVPAGVGSRGRIHLNHDEMRAMLTGGAQWAVDQGFGEARDLEFTEERGRVDGAEP
RDVSPRARERQKDEMGTLGSGNHYLEVQRVVEIFDQEVAEAYRLKIDAIVISIHCGSRGL
GHQIGTEFLKDMALAASQYHIALPDRELACAPLNSPLGKRYLGAMRAGINCALANRQIIT
HLTRQAMNEIFPGISIDLLYDVSHNTCKQERHIVGGVTQTVFVHRKGATRAFGPGHPDLP
TEYQSVGQPVLIGGSMGTSSYILCGTKQAEQRSFSSACHGAGRAMSRRQATKQWHGRALV
DQLAEQGILIRSPSLRGVAEEAPAAYKDVSAVVDSADKAGLAKKVARLEPVICIKG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggacctcaaacaattcattcaacgcgatgaaacttgctgggaaatcccggcgaaaggc
gcgatgcgagtgccggcaattatttatgccgatgcctcgctgttgcaagcgatggaccag
aaagtccatgaacagatctgcaatgtcgcggcgctaccgggcatcgtcgaggcggcctat
gcgatgcccgacgcgcattggggctacggttttcctatcggcggcgtcggggcgttcgat
gcggaccaaggcggtgtgatttctgccggcggcgtcggcttcgacatctcctgcggcgtt
cgcacattgcataccggcctgacgatgaacgacttgcaaggcgtcaaaaaagacctagcc
gacgaactctaccgcaccgtgccggccggggtcggcagccgaggccgcattcatttgaat
cacgacgaaatgcgcgcgatgctgaccggcggcgcgcaatgggccgtcgatcagggcttc
ggcgaagcacgcgatctcgaattcaccgaggaacgcggccgcgtcgacggcgccgaaccg
cgcgatgtatcgccgcgcgctcgcgaacggcaaaaagacgaaatgggcacgctcggctcc
ggcaaccattatctcgaagtacagcgtgtcgtcgaaattttcgatcaggaggtcgccgaa
gcctaccggctcaagatcgatgcgatcgtgatcagcattcattgcggttcccgaggactg
gggcatcaaatcggcaccgagttcttgaaagacatggcgctcgcggcgtcccaataccat
attgctctacccgaccgcgaactggcctgcgcgccgctgaattcgccgctgggcaagcgc
tatctcggcgcgatgcgcgccggcatcaattgcgcgctcgcgaaccgacaaatcatcacg
catttgacgcgccaagcgatgaacgaaatttttccgggcatttcaatcgacctgctctac
gacgtctcgcataatacctgcaaacaggaacgccatatcgtcggaggtgtgacgcagaca
gtcttcgtccatcgcaaaggcgcgacgcgtgccttcggtcccggccatcccgacttgcct
accgaataccaatctgtcggccaaccggtcttgataggcggctcgatgggcacgagttcc
tatattttgtgcggcaccaaacaggccgagcaacgctcgttcagttcggcctgccacggc
gcgggacgagcgatgagccgccgccaggccacaaaacagtggcacggacgggcgttggtc
gatcaattggccgaacaaggcattctgattcgcagcccatcattacgaggcgtcgccgaa
gaggcgccggccgcttacaaagacgtcagtgcggtcgtcgactccgccgataaggctggt
cttgcgaaaaaagtcgcgcgcctcgagcctgtcatttgcatcaagggctga
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