Methylotuvimicrobium buryatense: EQU24_02350
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Entry
EQU24_02350 CDS
T05995
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mbur
Methylotuvimicrobium buryatense
Pathway
mbur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQU24_02350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbur03019
]
EQU24_02350
Enzymes [BR:
mbur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EQU24_02350
Messenger RNA biogenesis [BR:
mbur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EQU24_02350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QCW81221
UniProt:
A0A4P9UM48
LinkDB
All DBs
Position
complement(503454..504818)
Genome browser
AA seq
454 aa
AA seq
DB search
MLFSELGLAAELVRAVSEQGYSTPTPVQRQAIPAILNGRDVLAGAQTGTGKTAGFTLPLL
HLLHTQKPKSNRRAVRALILTPTRELAAQVGESVDTYGKYLPLKSAVVFGGLSINPQIAQ
LRRGVDILIATPGRLLDHIAQKTVDLSQLEILVLDEADRMLDMGFIRDIRKILALLPPNG
HDGRQNLLFSATFSDEIRQLANSLLHKPEQIEVARRNTTVETVAQTVHPVDRNRKQELLS
HLIGSQDWRQVLVFTRTKHGANKLAEKLERDGIGSAAIHGNKSQAARTKALADFKSGAVR
ALVATDIAARGLDIDQLPHVVNYELPNIPEDYVHRIGRTGRAGNAGEAISLVCVDEHDFL
RDIERLIKRDINKIEIEGFQPDPTIKPEPVFKQRQQRSPRAGNDARNNGQRNNGKPNERQ
AAKPARSKPRRGNGANSGSGRPQQGRSGQRRLSA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttattttccgaactcggcctagcagccgaattagtccgtgctgtctcagaacaaggc
tacagcacgccaacacctgttcaacgtcaagcgatacccgcaattctcaacggtcgtgac
gttctggccggtgcacaaaccggtaccggcaaaaccgcggggttcacattacctttgctg
cacctgctgcacacccaaaaacccaaaagtaatcgacgtgcggtaagagcactgatccta
acgcctacgcgcgaactcgccgctcaagtcggcgaaagcgtcgatacttacggaaaatat
ttaccgctaaaatcggcggtagtcttcggcggcctcagtatcaacccgcaaatcgcgcaa
ttgcgtcgtggcgtggatatcctaatcgcgacgccgggtcgtctgctcgatcatatagca
cagaaaactgttgatttatcgcaattggaaatacttgtactcgatgaagccgatcgcatg
ctcgacatgggctttattcgcgatatccgtaaaattcttgcgttgcttccgccaaacggt
cacgatggccgacaaaacctactcttttcggcaacgttctccgatgaaatccgtcaacta
gctaacagcttgttgcataaaccggagcaaatcgaagtcgcgcgtcgtaatacgaccgtc
gaaaccgtagctcagacggttcatccggtcgaccgcaaccgtaaacaagaactcttgtcg
catctaatcggcagccaggactggcgtcaggtgttggtcttcacgcgtaccaaacacggc
gccaacaaactcgccgaaaaactagaacgcgacggaatcggctcggccgctattcacggc
aataagagtcaagccgcaaggacaaaagcattggccgacttcaaaagcggtgcggtacgt
gccttggttgcaacagacatcgcagcgcgcggattggatatcgaccaattaccgcatgtc
gtcaattacgaacttcccaatattccggaagattatgttcatcgcatcggccgtaccggt
cgagcgggcaatgccggagaagccatatcgctagtctgcgtcgacgaacacgattttctg
cgcgacatcgaacgattgatcaaacgagacattaacaaaatcgaaatcgaaggcttccaa
cctgacccgaccatcaaacccgaaccggtcttcaaacaacgccagcagcgctcgcctcgc
gccgggaatgatgcccgaaataacggtcaacgcaacaacggcaagccaaatgagcgccaa
gcagcgaagcccgctcgtagtaaaccgcgccgcggtaacggagcaaattccggctcaggc
cgcccgcaacaaggacgctcaggacaaaggcgccttagcgcttag
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