Methylotuvimicrobium buryatense: EQU24_02490
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Entry
EQU24_02490 CDS
T05995
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mbur
Methylotuvimicrobium buryatense
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbur03016
]
EQU24_02490 (thpR)
Enzymes [BR:
mbur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EQU24_02490 (thpR)
Transfer RNA biogenesis [BR:
mbur03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EQU24_02490 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QCW81246
UniProt:
A0A4P9UP03
LinkDB
All DBs
Position
534092..534613
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AA seq
173 aa
AA seq
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MIVKRLFFALWPDEAVRSKCEELARRLLKTGDRSVNPGNLHVTLVFLGAVNDVFESAMVQ
AVGEMKKLEPVTIHFDELSFWRKPGIICLTSSNPDDKAMILAESLSAMVSSLDHPIDGRA
YRPHVTLIRKAKQSFQTEFEPIIWHSNTFCLVESCSAPGGVDYRVIRQWSLLG
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
ataatcgtgaaaagactgttttttgcgttatggccggatgaggcggtccgaagtaaatgc
gaagagttggcgcgtcgtttgttaaagactggcgataggtcagttaatccgggtaacctt
catgtgacattggtatttttaggggctgttaacgacgtgttcgagtcggcgatggttcaa
gccgtcggcgaaatgaaaaagcttgagccggtcacgatccatttcgatgagcttagtttt
tggcgaaaaccgggcataatatgcttaaccagcagtaatccggacgataaggcgatgatt
ttagccgagagtttgtcggcaatggtttcatcgctcgatcatcctattgatgggcgagcc
tatcggccgcatgtgacactgataagaaaagccaagcaatcgtttcaaacggaattcgaa
ccgattatttggcattccaatactttttgtttagtcgaatcctgttccgcgcctgggggc
gttgattatcgggttattcggcagtggtcgctgctgggctaa
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