Methylotuvimicrobium buryatense: EQU24_03840
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Entry
EQU24_03840 CDS
T05995
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mbur
Methylotuvimicrobium buryatense
Pathway
mbur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EQU24_03840 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbur03021
]
EQU24_03840 (rpoB)
03400 DNA repair and recombination proteins [BR:
mbur03400
]
EQU24_03840 (rpoB)
Enzymes [BR:
mbur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EQU24_03840 (rpoB)
Transcription machinery [BR:
mbur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EQU24_03840 (rpoB)
DNA repair and recombination proteins [BR:
mbur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EQU24_03840 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QCW81476
UniProt:
A0A4P9UPJ8
LinkDB
All DBs
Position
815475..819551
Genome browser
AA seq
1358 aa
AA seq
DB search
MAYSFTEKKRIRNNFGKGTEVLDVPYLLATQINSYASFLQSGMSPEKRLNVGLHAAFSSV
FPIESHSGYAVLEYVKYRLGEPTFDVRECQQRGATFAAPLRVLVRLVIYDKDAPGSTKVV
KDIREQEVYMGELPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKLLFNA
RVIPYRGSWLDFEFDHKDCVYVRIDRRRKIPATILLRALGYNNEEMMDIFFETNRFVLAD
GSCLFDLVPERLRGEIAAFDFKHDGKVLIEEGRRITAKHIRQLKDAGVTQIEVPKSYLHG
KILSHNLIDESTGELIANVNDEITEELLDKVIDSGIQELNTIYVNDLDKGPYISNAMRLD
TSSTQLEALVEIYRMMRPGEPPTKESAENLFQNLFFTDDRYDLSTVGRMKFNRRLGRQET
TGEGTLSKEDIIDVLKELINIRNGNGNVDDIDHLGNRRVRSVGEMIENQFRVGLVRVERA
VKERLTLADSEGLMPQEIINAKPVSAAVKEFFGSSQLSQFMDQNNPLSQVTNKRRVSALG
PGGLARERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSLAVYARTNEYGFLETPYRKV
VDGKLTDQVEYLSAIEEGEFVIAQASVPVDENGRLKEGLVSCRYKDEFTLAMSDTVQYMD
VSSKQIVSVAASIIPFLEHDDANRALMGSNMQRQAVPTLRAEKPLVGTGMERTVAKDSGV
AVVATRGGTIEAVDAARIVVRVNDAETEAGEPGVDIYNLTKYTRSNQNTCINQKPLVKLG
DIVNAGDILADGPSTDIGELALGQNMLVAFMPWNGYNFEDSILVSERVVKEDRFTTIHIE
EKTCVARDTKYNPEEITADIPNVSEEALSKLDESGIVYVGAEVKGGDILVGKVTPKGETQ
LTPEEKLLRAIFGEKAADVKDTSLRVPNGVEGTVIDVQVFTRDGVKKDKRALEIEEDQIK
RYRKDLDDQLKIVEKDIFARVARMIVGKKALSGPDNLASGTVVNQEYLDKLRPSQWLQIK
MEDENINVQLEGVVEQIEQQRKDFDVKFDVKRKKITMGDDLPPGVLKMVKVYLAVKRRIQ
SGDKMAGRHGNKGVISMIRPIEDMPYTADGNPVDIVLNPLGVPSRMNVGQVLETHLGWAS
KGLGIKIGKMLEAQAKIVEIREFLEKIYNSSGRKEDLNSLSDKEILELAHNLVGGVPMAT
PVFDGATEDEIKTMLRLADYPEHGQTTLYDGLTGEPFEREVTVGYMYMLKLNHLVDDKMH
ARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVTGRTKM
YKNIVDGDHKMEAGMPESFNVLIKEIRSLGVNIELESD
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggcctactcttttaccgaaaaaaaacgcattcgtaacaactttggcaaaggtacagaa
gtacttgatgtgccatatctcttagcgacgcagatcaattcctacgcaagtttcctgcaa
tccggtatgtcgccggaaaaaaggttgaacgtaggcttgcatgctgctttttccagtgtt
tttccaatagaaagtcattccgggtatgcggttctggaatatgtaaaataccggttagga
gagccgacattcgatgtcagggagtgtcagcaaagaggtgcaacttttgcagcgccactg
cgagtgttggtgcgcttagttatttacgataaggacgcacctggaagtacgaaagttgtt
aaggatatccgggagcaggaagtctacatgggtgagttaccgttaatgaccgataacggt
actttcgtcatcaacggaaccgagcgggtaatcgtttctcagttgcaccgctctccgggc
gtgttttttgatcacgataaaggaaaaacgcattcatcaggaaaattattattcaacgca
cgagttataccttatcgcggttcttggcttgatttcgaattcgatcataaagactgtgtc
tatgtcagaatagatagacgtagaaagattcccgcaacgatcttgctaagagcgctgggt
tataacaacgaagaaatgatggatatcttcttcgaaaccaatcgctttgtcttggctgac
ggtagttgtttgtttgatttagtgccggagcgtttgaggggcgaaattgccgcattcgat
tttaagcatgacggaaaggttcttatcgaagaaggacgacggattacggcaaaacatata
cgccaattaaaagatgctggggtcactcaaatcgaagtccctaaaagttatttacacgga
aaaatattaagccataatctgatcgatgaatcgactggtgagcttattgccaatgtcaat
gacgaaataaccgaagaattgctcgataaagttattgatagcggtatacaagaactaaat
acgatttatgttaacgatctggataaagggccgtatatttctaatgcgatgcgcttggac
acgagtagcacgcagctggaagcattagtagaaatttaccgcatgatgaggccgggtgag
ccgccgacaaaagaatcggcagaaaatctatttcaaaacttgttttttaccgatgaccgc
tacgatttatcgacggttgggcgcatgaagttcaatcggcgcctgggtcgtcaagaaaca
accggagaggggacgctcagcaaggaagacatcattgatgtattaaaggaattgatcaat
atccgaaacggaaacggtaatgtcgatgatatcgatcatttgggtaaccgaagagtccgt
tcggttggcgagatgatcgagaaccaattccgagttggcttggtcagggtagaacgtgcg
gttaaagaacggctgacattagccgattccgaaggcctgatgccgcaggaaattatcaac
gcgaaaccggtatctgcggcggttaaagagtttttcggctcaagccagctgtcacagttc
atggatcaaaataatccgctttctcaagttacgaacaagcgccgggtatcggctttgggc
ccgggtggattggcgcgcgaacgtgccggcttcgaggtgcgtgatgttcataccacgcat
tacggacgcgtttgcccgatcgaaactccggaggggccgaatattggtttgatcaactca
ttggccgtgtatgcacgtaccaatgaatatggctttcttgaaacaccttacagaaaagtt
gtcgacggtaaattgaccgatcaagttgagtatctttcggcgatcgaagaaggggagttt
gtgattgctcaggcttccgtgccggtggatgaaaacgggcgattaaaggaaggcttggta
tcctgccgttataaagatgaatttacgttggcgatgtccgataccgtccaatacatggac
gtatcatcaaaacaaatagtttcggttgccgcgtctattatcccgttcttagagcacgat
gacgcgaatcgggcattaatgggttccaatatgcaacgtcaagcggttccgacactaaga
gccgagaagccgttagtgggtacgggtatggaacgcacggtggcaaaggattccggggtg
gctgtcgtggcaacgagaggcgggactattgaggctgtcgatgccgccagaattgtggtc
agagtaaacgatgcggaaaccgaagcaggtgagccgggtgtcgatatttataatctgacc
aagtacacaagatccaaccaaaatacctgtattaaccaaaaaccattggttaagcttggc
gacatcgtcaatgccggggatatattagctgatggaccctcgaccgatatcggcgaattg
gctttaggtcaaaatatgcttgtggcttttatgccttggaatggatacaacttcgaggat
tcgattttagtttccgagcgtgttgttaaagaagatcgttttacgaccattcatattgaa
gaaaaaacctgtgttgctcgggatactaaatataatccggaagagattaccgctgacatt
cctaacgtcagcgaagaagcgttatcgaaattggatgagtccggaatcgtttatgtgggt
gccgaggtcaaaggcggcgatattctggtcgggaaagtgacaccgaaaggtgagacgcaa
ttaacaccagaggaaaaactattacgtgcaattttcggtgagaaagcggcggatgttaaa
gacacgtcattaagagtaccgaacggcgttgaagggaccgttatcgatgtccaggtcttt
acacgagatggtgttaagaaggataagcgtgctctcgaaatcgaagaagaccaaatcaag
cgttatagaaaagatctggatgatcagctgaaaattgtcgaaaaggatatttttgcgcga
gtcgctagaatgattgtcggcaagaaagctttgtccgggcctgataatttagcgtctggt
actgttgttaatcaagaatatctggacaaattgagaccttctcaatggctgcaaatcaaa
atggaagatgaaaacatcaatgtccaattggaaggagtcgtcgagcaaatcgaacagcag
agaaaggatttcgacgtcaagtttgatgtgaaacgcaaaaagatcaccatgggcgacgat
ttgcctcctggtgttcttaaaatggttaaggtttatctggcggtcaagagaagaattcag
tctggcgataaaatggccgggcggcatggaaataaaggggttatttctatgattagaccg
atcgaagacatgccatatactgccgatggaaatccggtcgatatcgtattgaatccgctt
ggggttccgtcacgcatgaatgtggggcaggtgttggaaacccatttgggttgggcctct
aaaggtttggggatcaagataggtaaaatgctcgaggcccaagcaaaaatcgttgaaatt
agagagtttttagaaaaaatctataatagcagcggtcgcaaagaggacttgaattcctta
tccgataaagagattttagaattagcacataatttggtcggtggtgtgccgatggctact
ccggtgttcgatggcgctaccgaagatgaaattaaaaccatgctgagactggctgattat
cccgaacatggtcaaaccacactctatgatggattgaccggggagcctttcgagcgagaa
gtcacagttggctacatgtatatgctgaaattgaaccatctggttgacgataagatgcat
gctcgatcaacaggtccgtacagcttagtcactcagcaaccgcttggtggaaaggcgcag
ttcggtggccagcgcttcggggagatggaggtctgggcgcttgaggcttatggagcggct
tacaccttgcaggaaatgttgaccgtgaaatctgatgatgtaacaggtagaaccaaaatg
tataaaaatatcgtcgatggcgaccacaagatggaagctggcatgccggaatcgttcaac
gtcttgatcaaagaaatacgttcactcggtgtcaatattgagttagaaagcgattga
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