Methylotuvimicrobium buryatense: EQU24_12580
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Entry
EQU24_12580 CDS
T05995
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mbur
Methylotuvimicrobium buryatense
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mbur03009
]
EQU24_12580 (rlmD)
Enzymes [BR:
mbur01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
EQU24_12580 (rlmD)
Ribosome biogenesis [BR:
mbur03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EQU24_12580 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
RrnaAD
Methyltransf_25
TRM5-TYW2_MTfase
TRAM
PCMT
MTS
Methyltransf_15
Methyltransf_11
Methyltransf_2
DOT1
Methyltransf_32
Methyltransf_23
Methyltransf_12
Methyltransf_4
PrmA
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
QCW82979
UniProt:
A0A4P9UNL9
LinkDB
All DBs
Position
complement(2818323..2819666)
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AA seq
447 aa
AA seq
DB search
MARRKRERKKLPDTPVKTIIDSLTHDGRGVAHVDGKAVFIDAALPGEELEFVYTDIRRDF
AEGRVVKLLNKAECRVEAECPHYDVCGGCSFQHVASSEQIHIKEELLKEQFKRIGKLDIP
EIWPSLDGPHWGYRRKARMGVKYVAKKGRVLVGFREKRQPFLAEIESCKVMHPVIGTRLM
ALSEMIGGLTIREKIPQIEVAIGDEDCVLAVRVLEPPTDEDKERMRSFAHKHNVTLCLQS
KGPDTIAPIDGEPVVTPTYALPEHDIVFRFRPAMFTQVNYEINRLMVNRVIEALDLTKDD
VVLDLFCGLGNFTLPMARYAGKVVGIEGDLPLVNHARANARLNNLDNVEFHAADLSKAIV
DLPWAKQRYNKILLDPSRAGASEVLHHFKQWQPESIVYVSCNPSTLARDAGILVNDLGFK
LVKAGVMNMFPQTAHVESIALFNAADR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggagaaaaagggaacgtaaaaaattaccggacacccccgttaaaaccatcatc
gattcgctgacgcatgacgggcgaggggttgcccatgtagacggcaaggcggtatttatc
gatgcggccttgccgggtgaggaactcgaatttgtctataccgacattcgccgcgatttc
gccgaaggccgggtcgtcaagctattgaataaggccgagtgccgcgtcgaggccgaatgc
ccgcattatgacgtatgcgggggctgcagttttcagcatgtcgcttcaagcgagcaaatc
catattaaagaggaattgctgaaagagcagtttaaacgcatcggtaagctcgatattccc
gaaatttggccgtcattggacgggccgcattggggttatcggcgcaaggcgcgcatgggt
gtcaaatatgtcgcgaaaaaaggcagagtgctcgtcggttttcgcgaaaagcgccaaccg
tttttggccgagatcgaaagctgtaaggtcatgcatccggttatcggaacgcgcttaatg
gctttatcggagatgatcggcggcttgacgatcagagagaaaattccgcaaatcgaagtt
gcgatcggcgatgaggattgcgtgcttgcggtacgcgtactggagccgccgaccgacgag
gataaggagcgaatgcggtcttttgcacataagcataatgtgaccttgtgtctacagtcg
aaaggccccgatacgattgcgccgattgatggcgaaccggtagtaaccccgacctatgct
ttgccggagcacgatattgtattccggttcagaccggcgatgtttacgcaagtcaattat
gaaatcaaccggctaatggtcaaccgggtcattgaagcgttggatttaactaaggacgat
gtcgtgctggatttgttctgcgggcttggaaactttaccttgccgatggctcgttatgca
gggaaagtggtcggtatcgaaggcgatttgccgttggtcaatcatgcacgggcgaatgcc
cgcttaaacaatctggataatgtcgagtttcacgcagccgacttgagcaaggcgattgtc
gatttaccgtgggcgaaacagcgctataacaaaattttgctcgatccgtcgcgagccggc
gcatcggaggtattgcatcatttcaagcaatggcagcccgaaagtatcgtctatgtctcg
tgtaatccgtcgaccttggcccgcgatgcaggcattctggtgaacgatttaggttttaaa
ctggtaaaagccggcgtcatgaatatgttcccgcaaaccgcgcatgtggaatcgattgcg
ctgtttaatgccgctgatcggtga
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