Methylotuvimicrobium buryatense: EQU24_12660
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Entry
EQU24_12660 CDS
T05995
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mbur
Methylotuvimicrobium buryatense
Pathway
mbur03420
Nucleotide excision repair
mbur03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EQU24_12660
03430 Mismatch repair
EQU24_12660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbur03400
]
EQU24_12660
Enzymes [BR:
mbur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EQU24_12660
DNA repair and recombination proteins [BR:
mbur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EQU24_12660
MMR (mismatch excision repair)
Other MMR factors
EQU24_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCW82993
UniProt:
A0A4P9UR18
LinkDB
All DBs
Position
complement(2842218..2844383)
Genome browser
AA seq
721 aa
AA seq
DB search
MDITSIINPLNDAQREAVSAPSRAMLVLAGAGSGKTRVLVHRIAWQIQVEGHSPHSILAV
TFTNKAATEMRTRIEDLLNISARSMWIGTFHGLAHRLLRRHAKDAQLPETFQVMDSDDQL
RLIKRLYKNLNLDEAKWPPKQAQWYINGQKDEGIRAKHMPETGDFFQRQMLAIYKAYEEV
CQRSGLVDFAELLLRAHELLRDNPETLSFYQQRFRHVHVDEFQDTNTIQYAWLRLLTQDR
DNLFVVGDDDQSIYGWRGAKIENIYRFQKHFPNHKVVKLERNYRSTGHILKAANRVIEHN
EGRMGKELWTESGDGEPISVYAAFNEQDEAYYVVERIRKWVHEGGSRSDIAILYRSNAQS
RQFEEKLIATSIPYRVYGGLRFFDRAEIKNALAYLRLMANPDDDASFERVINTPTRGIGA
KSLDDIRVLARDKNLSLRQAVEFAIAQKLTTPRAGNAMSGFIALVRSLAEQTQGLPLFEQ
VKIVVEKSGLIEFYKKEKGDKGEARVENLEELVNAARLYEYDQDNEENLSELDMFLTHAA
LEAGEMQSNAEQDCVQLMTLHAAKGLEFKRVFMVGFEEGLFPSQQSVEDPGRLEEERRLC
YVGMTRAMENLCLTYAESRRLWGRETYPKASRFLREIPAETLQEVRMRAQVSRPVSFTGN
MDSHEPGTYKLGQRVRHEKFGEGVVLQREGSGAQERIQINFQAVGIKWLMLSYAKLEGVG
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatattacttcaattattaatcctctcaatgatgcccagcgcgaggcggtatcggca
ccttctcgcgcaatgttggttttagccggcgccggcagcggcaagacccgggtcttggtg
catcgcatcgcctggcagattcaagtcgaaggccattcgccgcatagcatcttagccgtc
acctttactaataaagccgcaacggaaatgcgcactcgcatagaagacctgctcaatatt
tctgcacgctcgatgtggataggtacctttcatgggcttgcgcatcgtttgctcaggcgt
cacgcaaaagatgcgcaactgccagaaacctttcaagtcatggactcggacgatcagttg
cgcctgatcaagcgcctctacaaaaacctgaatctggacgaggccaagtggccgcccaag
caagcgcaatggtatatcaacgggcaaaaagacgagggtattcgagccaagcacatgccg
gaaaccggggattttttccagcggcaaatgctggcgatttataaggcttatgaagaggtc
tgtcagcgctccggtctggtcgattttgccgaactgctgctacgcgcgcatgaattgctg
cgcgataatcccgaaaccttgagcttttatcaacaacggttccggcatgtgcatgtcgac
gaatttcaagataccaatacgatccaatatgcttggttacggttgttgacgcaagaccgc
gataatctgttcgtggtcggcgacgacgatcaatccatttacggatggcgcggcgcaaaa
attgaaaatatctaccgttttcagaagcattttccgaatcataaagtcgtcaaactggaa
cgaaactaccgttcgaccggccatattctgaaagcggccaaccgggtgatcgaacataac
gaaggacggatgggcaaggagctttggaccgaaagcggcgacggcgagccgatttcggtc
tatgccgcattcaacgagcaagacgaggcttattatgtcgtcgagcgtattcggaaatgg
gtccatgaaggcggttcgcgaagcgatatcgcgattctttaccgctccaatgcgcagtcg
cgccagttcgaggaaaagctgatcgcgaccagtattccttatcgtgtctatggcggcttg
cgctttttcgatcgggccgaaatcaagaatgccttggcttatttgcgcctaatggccaat
cccgatgacgatgcatctttcgaacgcgtaatcaatacgccgacgcgcggtataggggct
aaatcattggacgacattcgggtattggcgcgggataagaatttatcgcttcggcaggcg
gttgagttcgcgattgcacaaaaattgacgacgccaagggctgggaatgccatgtccgga
ttcattgctttagttcggagtttggccgaacagacgcaaggtttaccgttgttcgagcaa
gttaagatcgtcgtcgaaaagtccgggttgatcgagttttataaaaaagaaaaaggcgat
aagggcgaggcccgcgtcgaaaacttagaagaattggtcaatgccgctcgactgtacgag
tacgaccaggataacgaagaaaacctgagcgaacttgacatgtttttgacgcatgcggcg
ctcgaagccggtgaaatgcaaagcaatgccgaacaagattgcgtgcagctgatgaccttg
catgccgctaagggcttggaattcaagcgggtgttcatggtcggcttcgaggaaggtttg
tttccgtcgcaacaatcggtcgaggatccggggcgcttggaagaagagcgtaggctatgt
tatgtcggcatgacccgcgcgatggaaaacttgtgtttgacctatgccgaatcccggcgc
ttgtgggggcgcgaaacctatccgaaggcttcgcggtttttgcgagaaattccggccgaa
acgcttcaggaagtcaggatgcgcgcccaggtcagccgtccggtttcattcaccggaaac
atggatagtcatgagccggggacatacaaattagggcagcgcgttcgtcacgaaaaattc
ggcgaaggggtggtgctgcaaagagaaggtagcggcgcacaggagcgcattcagatcaat
tttcaagcagtaggcatcaaatggctgatgttatcttatgccaagttggaaggggtgggg
gcgtaa
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integrated database retrieval system
