Methylotuvimicrobium buryatense: EQU24_13230
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Entry
EQU24_13230 CDS
T05995
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mbur
Methylotuvimicrobium buryatense
Pathway
mbur03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EQU24_13230 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbur03400
]
EQU24_13230 (uvrA)
DNA repair and recombination proteins [BR:
mbur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EQU24_13230 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EQU24_13230 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
RsgA_GTPase
AAA_22
nSTAND1
nSTAND3
DnaJ_CXXCXGXG
AAA_25
AAA_21
cobW
Viral_helicase1
ScfRs
Zn_ribbon_8
SAM_5
Motif
Other DBs
NCBI-ProteinID:
QCW83089
UniProt:
A0A4P9UNW6
LinkDB
All DBs
Position
2952615..2955431
Genome browser
AA seq
938 aa
AA seq
DB search
MDTISIRGARTHNLKNIDLDLPRDSLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARAGTPRC
PDHNVSLAAQTVSQMVDSLLEQPEGGRWMLLAPVISQRKGEYLQLLEDLRAQGFIRARID
GAVYDLDETPALDPKKKHTIEVIVDRFKIRNDIALRLAESFETALRIADGIALAVSMDDN
TTLLFSERYACPHCGYSLSELEPRIFSFNNPKGACPTCDGLGVRQHFDPELVVHNPNISL
AGGAIRGWDRRNAYYYQIICSLAEHYGFDPEIPYQDLPDNIKKALLFGSGNEAIEFKLIG
GPRAGQTKRYSFEGIIANMDRRYHETDSPMVREELAKYLSQKTCPDCGGARLNKAARHVF
VNERPLHELTRLPIRKSLQFFEELDLPGKQGEVAAKIIKEIVERQEFLVNVGLDYLTLDR
SADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNDRLLNTLFRLRDLGNTVI
VVEHDEDAIRSADHIVDIGPGAGIHGGRIVAQGSPQDIIDSPDSLTGQYLSGKQMIVIPK
STTPVDPEKRIVIRNAQGNNLKNVDIALPVGLLTCITGVSGSGKSTLINDTLYRYVARAI
NRAGTLPAPCDEIEGIEYFDKVIDINQSPIGRTPRSNPATYTGIFTPIRELFAATPEARS
RGYTPGRFSFNVKGGRCEACKGDGVIKVEMHFLPDIFVHCDVCGGKRYNRETLEIRYKGK
AINEVLDMTVEDAAQFFSAVPVLSKKLHTLTEVGLNYITLGQNAVTLSGGEAQRVKLAKE
LSKRDTGKTLYILDEPTTGLHFHDIKQLLRVLHTLRDHGNTVIVIEHNLDVIKTADWIID
MGPEGGDGGGTLVAEGTPQQLSKNNASHTGHYLKRFFS
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggacaccatcagcattcgcggcgcgcgcacccataacctaaaaaacatcgacctggat
ttgccccgcgactcattgattgtcattaccggtctctcaggttccggtaaatcgtcactg
gctttcgacacgatttatgccgaaggccaacggcgctatgtcgagtcgctatccgcctat
gcccggcaattcctgtcgatgatggaaaaaccggatgtcgatcatatcgagggactgtcc
ccggccatttcgatcgaacaaaaatcgacctcccacaatcctcgctcgacggtcggcaca
attaccgaaatctatgattacttgcgtttgctgtatgcccgcgcaggcacgcctcgctgc
cctgaccataatgtttcattagccgcacaaaccgtcagccagatggtagatagcctgctc
gaacaaccggaaggcgggcgctggatgttattggcacccgtcatcagccagcgtaaaggg
gaatacctgcaattgctcgaggatttacgcgcgcaaggctttatcagagcacgtattgac
ggcgccgtatacgatctcgacgaaacgccggcgctcgaccccaagaaaaaacacacgatc
gaagtgatcgtcgatcgattcaaaattcgtaacgacatcgcattgcgccttgccgagtca
ttcgaaacggcgcttcgcatcgcagacggtatcgcgctggccgtttccatggacgacaac
acaaccttattattttccgaacgctacgcctgtccgcactgcgggtacagcctcagcgaa
ttagaaccgcgcattttttcgttcaacaacccgaaaggtgcttgcccaacttgcgatgga
cttggtgttcgtcaacacttcgatccggaactggtggtgcataatcccaacatcagccta
gccggcggggcaatccgaggctgggaccggcgcaacgcttattattatcaaattatctgt
tcgctggccgaacactacggtttcgatccggaaatcccttatcaggatctaccggacaac
atcaaaaaagcattattattcggcagcggcaacgaagcgatcgagttcaaactgataggc
ggaccacgcgccggccaaaccaagcgctacagctttgaaggcatcattgcgaacatggat
cgccgttaccatgaaaccgactctccgatggtccgtgaggaactggccaaatatctatcg
caaaaaacttgtcctgactgcggcggagcccgcctaaacaaggctgcccgccatgttttc
gtcaacgaacgacctttgcacgaactcacccgccttccgatacgcaagtctttacagttt
ttcgaggaattggatttacctggaaaacaaggcgaagtagctgcgaaaatcatcaaggaa
atcgtcgaacgacaagagtttttggttaatgtcggcctggactacctgaccctcgatcgt
agcgccgatacgctgtccggcggcgaagcgcaacgtatccggctggccagccaaatcggc
gcaggcttagtcggcgtgatgtatgtgctcgacgaaccgtcaatcggcctgcatcagcgc
gataacgaccgcttgttgaataccctgttccggctcagggatttgggtaataccgtaatc
gtcgtagaacacgacgaagatgcgatacgctcggccgatcatatcgtcgatatcggcccc
ggcgccggtattcacggcggtagaatcgtcgcacagggatcgccgcaagacatcatcgac
tcgcccgattcgctgaccggccagtatttatcggggaaacaaatgattgtgattccgaaa
agcacgacgccggtcgacccggaaaagcggatcgtgatccgcaacgcccaaggcaataac
ctgaaaaacgtcgatatcgctctgccggtcggcctacttacctgtatcaccggcgtatcc
ggctcagggaaatcgacgctcatcaacgatacgctctaccgctatgttgcgcgcgcaatc
aatcgagctggcaccctgcccgcaccttgcgatgaaatcgaaggcattgaatatttcgat
aaagtcattgatattaatcaaagccctataggccgaacgccccgttcgaatccggccact
tataccggaatttttacgcccatccgggaattatttgcggcaacgcctgaagcccgatca
cgcggttacacgccggggcgcttcagcttcaacgtcaaaggcggccgctgcgaggcctgc
aaaggcgatggagtcatcaaagtcgaaatgcatttcttgccggatattttcgtacattgc
gacgtctgcggcggtaaacgttataaccgtgaaacgctggaaatccgctataaaggcaag
gcaatcaacgaagtattggatatgaccgtcgaggatgccgcgcaatttttcagcgccgtc
ccggtattatccaaaaaactgcacaccttgaccgaagtgggactgaactacatcacgctc
ggacaaaatgccgtcacgctttccggtggcgaagcacagcgcgtcaaactggccaaggaa
ctctcgaaacgcgataccggcaaaacgctctatattctcgacgagcccacaactggcctg
catttccacgatatcaaacaattattgcgcgtattgcatacactacgcgatcatggcaac
accgtgatcgtcatcgagcataacctggacgtgatcaaaacggcagattggattattgat
atgggaccggagggcggcgatggtggaggcacactggtcgctgaaggtacaccgcaacaa
ttgagtaaaaacaacgcctcgcataccgggcattatttaaaacgattttttagctga
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