Methylotuvimicrobium buryatense: EQU24_18015
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Entry
EQU24_18015 CDS
T05995
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mbur
Methylotuvimicrobium buryatense
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mbur03032
]
EQU24_18015 (topA)
03400 DNA repair and recombination proteins [BR:
mbur03400
]
EQU24_18015 (topA)
Enzymes [BR:
mbur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EQU24_18015 (topA)
DNA replication proteins [BR:
mbur03032
]
Prokaryotic type
DNA Topoisomerases
EQU24_18015 (topA)
DNA repair and recombination proteins [BR:
mbur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EQU24_18015 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QCW83922
UniProt:
A0A4P9UR28
LinkDB
All DBs
Position
complement(4017312..4019627)
Genome browser
AA seq
771 aa
AA seq
DB search
MSNNLVIVESPAKAKTIEKYLGKDFHVLASYGHVRDLIPKEGAVDPEHDFAMKYEIIDRN
QRHVQAITKAIKQAQALYLATDPDREGEAISWHLYELLKEKKLLKDKPVHRVVFHEITKK
AVTEAIAHPAELSIDLINAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIV
ERELEIEAFKSREYWSIDADLSADEQAFKAKLTQFDGEKVEQFTIDNEERALQVKQTLLD
AADGKLLVAKVEKKQRKRNPAPPFITSTLQQEAARKLGFTTKRTMMVAQQLYEGIDIGGE
TVGLITYMRTDSVNLAAEAIAEMRELIAEKYGAKNVPKSPREFKTKSKNAQEAHEAIRPT
SARRIPAELQKFLSPEQFKLYDLIWKRTISSQMIHATINTVAVDLHCGNERNVFRATGST
IADPGFMAVYLEGKDDTAEGDDKENFLPSLEEGRPVPLNDIIAGQHFTEPPPRYSEASLV
KALEEYGIGRPSTYASIISTLQNRDYVTLESKRFYPTDVGRIVNKFLTEHFNKYVDYDFT
ANLEDELDAVSRGEKDWIPLMRSFWVPFNTLIHEKEESVQRKDVTQEAIDEKCPECGSPL
SIRLGRNGRFIGCTNYPECSYTRNLNEDASKSSEPEVVEGRVCPKCESPLVIKTGRYGKF
IGCSGYPKCKHIEPLEKPVDTGVECPQCKKGNLLKRKSRNGKIFYSCSEYPKCSYAIWNA
PVQESCPECNWPILTLKSTKRRGAEKVCPQKECSYATPYEGDPDDVLGPKG
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataacctcgttattgtagaatcgcctgcaaaagctaaaaccattgaaaaatat
ctcggcaaggactttcacgtactagcttcttacggccatgttcgagacctgatcccgaaa
gaaggcgcggtcgatcccgaacatgacttcgcgatgaaatatgaaatcatcgatcggaat
cagcgccatgttcaagcgataacaaaagccataaagcaagctcaagcgctttatctagca
accgacccggacagggaaggtgaggcgatctcctggcatttatacgaattgctcaaggaa
aaaaaactgctcaaggataaaccggttcatcgcgtcgtctttcatgagatcacaaaaaaa
gcggtcaccgaggcgattgcgcatccggccgaactgtcgatcgatttaattaatgcgcag
caggctcgtcgcgccctggattacttggtaggatttaatctatcgccgcttttgtggaaa
aaaatccgacgagggctttcggcgggacgcgtgcaaagccccgcgttgcgcttgatcgtc
gagcgcgaactggaaatcgaagcgttcaagagccgggaatactggtcgatcgacgccgat
ttgagcgcggatgaacaagcctttaaggccaagttgacgcaattcgacggtgaaaaagtc
gagcagttcacgatcgacaacgaggagcgtgcgctacaggtcaagcaaactttactcgat
gctgccgacggcaaattgttggtcgcgaaggtcgaaaaaaagcagcgtaaacgtaatcct
gcgccgccgttcattacttcgacgttacaacaagaagccgcgcgtaaactcggatttacg
accaagcgcacgatgatggtcgcgcagcagttatacgaaggcatcgatatcggcggcgag
acggtcggtttgattacttacatgcgtaccgattcggttaatctcgcagctgaggcgatc
gccgaaatgcgcgaactgatcgccgaaaaatacggtgctaaaaatgtgccgaagagcccg
cgcgagttcaagactaaatcgaaaaacgctcaagaagcgcacgaagcgatacgtccgact
tcggcaagacggattccggccgagctgcaaaaatttttaagccccgaacaattcaagctt
tacgatttgatttggaaacgcacgatctcgagccaaatgattcatgcgacgattaacacc
gttgcagtcgatctgcattgtggcaatgaacggaatgtgtttcgggcaaccggttctacg
atcgccgatccgggcttcatggccgtgtacctggaaggcaaggacgacactgccgaaggc
gacgacaaggagaattttttaccgtctctcgaagaagggcgcccggtcccgctcaatgat
attatcgccggccagcattttaccgaaccgccgccgcgctacagcgaggccagtttggtc
aaggcgctcgaagaatacggcattggccgaccttcaacttatgcatcgattatctcgaca
ttacaaaaccgtgattatgtcactttggaaagcaagcggttttatccgactgatgttggt
cgcatcgtcaataagtttttgactgagcattttaataaatacgtcgattatgatttcacc
gcgaacctcgaagatgagctcgatgcggtgtcacgcggtgaaaaagactggattccattg
atgcgctctttttgggtgcctttcaatacgctgattcatgaaaaagaagaaagcgtgcag
cgcaaggatgtcacgcaagaggcgattgatgaaaaatgtccggaatgcggcagccctttg
tcgataaggctggggcggaatgggcgctttattggttgtaccaattacccggaatgttcc
tatacgcgcaatttgaacgaagacgccagtaaatcgtccgaaccggaagtcgtcgaaggc
agagtttgtccgaagtgcgaatcgccgttggtgattaaaaccggacgttacggcaagttc
atcgggtgtagcggctatcctaaatgcaaacacatcgagccgctcgaaaagccggtcgat
accggtgtcgagtgcccgcaatgcaaaaaaggcaatctgctcaagcgtaaatccagaaac
ggcaagattttttattcctgttcagagtatccgaaatgcagctatgcaatatggaatgcc
ccggttcaggaaagttgcccggaatgcaattggcctattttgaccctaaaatccaccaag
cgccggggtgccgaaaaagtgtgcccgcaaaaggaatgtagctatgctacgccatatgaa
ggcgatcccgatgatgttttagggcctaagggatag
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