Methylotuvimicrobium buryatense: EQU24_21640
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Entry
EQU24_21640 CDS
T05995
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mbur
Methylotuvimicrobium buryatense
Pathway
mbur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQU24_21640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbur03019
]
EQU24_21640
Enzymes [BR:
mbur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EQU24_21640
Messenger RNA biogenesis [BR:
mbur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EQU24_21640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
UTP25
Motif
Other DBs
NCBI-ProteinID:
QCW84548
UniProt:
A0A4P9USN3
LinkDB
All DBs
Position
complement(4889130..4890446)
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AA seq
438 aa
AA seq
DB search
MNTTHLTQTRFSNLELSDSILHGLTEAGFTHCTPIQDRSLPLSLRDKDIAGQAQTGTGKT
ATFLLATFQRLINDESEKIKNPRAVILAPTRELAIQIHKDALQLGKYLNLKFALIYGGTD
YKKQMDTIKSNVDIIIGTPGRIIDFYRQGTFTLDNVQVMVLDEADRMFDLGFIKDIRFLL
RRMPPADKRLNMLFSATLSYKVTELAYEHMNQPVLIKIETEEVTSKAIRQSAFCPSNEQK
IPLLLGVLKKYAPQRSIIFVNTKRCAERLNDYLNANGFVTAVLSGDVPQEKRQRLLTDFQ
ENKIRLMIATDVAARGLHIADVSHVINYDLPQEVEDYVHRIGRTARFGASGEAISFICEE
YAYSMPDIETYIGQKVPIQSITADLLAEVVKPERKPRPERPARNSQSKYPEKPRKKPVPR
DKSAQAVTSPASVPENPQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaacgcatcttactcaaacccgattcagcaatttggagttatccgattcgata
ttgcacggactgaccgaggccggctttacgcattgtactccaatacaggatcgttcgttg
cctttgtcattaagagacaaggatatcgcagggcaagctcaaaccggaaccggcaaaaca
gcaacctttttactggctacctttcagcgcttaatcaacgacgaaagtgaaaagatcaaa
aaccccagggcggttatattagcacctacccgggagcttgccattcagattcacaaagat
gccttgcagctgggcaaatatttgaaccttaagtttgcgcttatatacggtgggaccgac
tataaaaaacaaatggataccatcaagtccaatgtcgatattatcatcggcacaccgggc
cgtattatcgacttttatcggcaagggactttcacgctggataacgtgcaggtaatggtg
ctcgatgaagccgaccggatgttcgatctagggttcattaaggatattcgattcttgtta
agaaggatgccgccggccgataagcgattgaatatgctgttttcggcaactttatcctac
aaagtgaccgaactggcttacgagcatatgaatcagccggtacttatcaaaatcgaaacg
gaagaagtcacctccaaggccattcggcaaagtgcgttttgtccgtccaacgaacagaaa
ataccgctattattgggcgtattgaaaaaatatgcgccgcaacgcagcattattttcgtc
aacaccaaacgttgtgccgaacgacttaacgactatctgaatgccaatggcttcgtcacc
gctgttttgagcggcgatgtccctcaggaaaaacgtcagcggttattgactgatttccag
gaaaacaaaattaggctcatgatcgcgaccgatgtcgcggcgcgcgggttgcatatcgcc
gacgtgtcgcatgtgatcaactatgatttacctcaggaagtcgaggattacgtacaccga
atcggcagaaccgcgcgtttcggcgccagcggcgaagcgatcagttttatttgcgaagaa
tacgcctattcgatgccggacatcgaaacttatatcggtcaaaaagttccgattcaatcg
ataacggccgatttgctggctgaagtggtcaagcctgagcgcaagcctcggccggagagg
cccgcacgtaatagtcaaagtaagtacccggaaaagccgagaaaaaagccggtgccgcga
gataagtctgctcaagccgttacaagccctgcatcagttcccgaaaatcctcaatag
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