Methanosarcina barkeri Wiesmoor: MSBRW_0090
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Entry
MSBRW_0090 CDS
T03839
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBRW_0090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbw03019
]
MSBRW_0090
03009 Ribosome biogenesis [BR:
mbw03009
]
MSBRW_0090
04131 Membrane trafficking [BR:
mbw04131
]
MSBRW_0090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbw04147
]
MSBRW_0090
Messenger RNA biogenesis [BR:
mbw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBRW_0090
Ribosome biogenesis [BR:
mbw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBRW_0090
Membrane trafficking [BR:
mbw04131
]
SNARE
SNARE associated proteins
Others
MSBRW_0090
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBRW_0090
Exosome [BR:
mbw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBRW_0090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
CDC48_2
RuvB_N
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
nSTAND3
AAA_28
Vps4_C
Sigma54_activat
ABC_tran
AAA_7
AAA_3
AAA_17
IstB_IS21
Mg_chelatase
RNA_helicase
NPHP3_N
AAA_18
Zeta_toxin
ATP-synt_ab
TsaE
AAA_24
DUF815
Parvo_NS1
PhoH
NB-ARC
SLFN-g3_helicase
AAA_30
AAA_11
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-ProteinID:
AKB49343
UniProt:
A0A0E3QI35
LinkDB
All DBs
Position
89609..91873
Genome browser
AA seq
754 aa
AA seq
DB search
MIEEINLRVAEAYHKDVGRGIARIDTRLMQQMGLVSGDIIEISGRAKTYAIVWPNVEREQ
ENRIRIDGNLRSNAKVGIDDRVTIQKVQAKNAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTDIVIKEKSAEEIRVPEGISYEDIGG
LRREIQLVREMIELPLRHPELFQKLGIEPPKGVLLHGPPGTGKTLIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFEEAEKEAPSIIFIDEIDSIAPKRGEVTGELERRVVAQL
LSLMDGLNSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRKQILLIHTRGM
PIQDVSLSEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEDEIPQEILDKLVVTK
DDFKEALKNIEPSAMREVYVEVPHVGWEDIGGLENAKQELIEAVEWPLKYPELFSSINIK
PPRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAVRETFRKAKQA
APTVVFFDEIDSIAPQRSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDP
ALLRPGRFDRLIYIKPPDNISREKIFEIHTQGKPLAEDVNLSELADMTEGYVGADIEGIC
REAAMLALREIVTPGASRKDIEKRAGEVIISKKHFERAIRRVKPTTSRESLAAYERSAEL
FAKYATEFEEEAPEAEEQEKELEHENVPDFFQAQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagaaattaatttgagagttgctgaagcttatcataaggacgtgggcagggga
attgcaagaattgacactcgcttgatgcagcagatggggcttgtaagcggggacataatt
gagatttcagggagagcaaagacctatgcaattgtctggccaaatgtggagcgtgaacag
gaaaatcggatccggattgacggaaacttgcgcagtaatgccaaagttgggattgatgac
agggttacaatccagaaagtccaggcaaaaaacgctcagagagttacccttgctccttct
cagcctgtaagacttgttggaggggctcactacatccttagaattattgaggggagacct
ttgaacaaaggtcagcagatcagggtggaaactgtaaataaccctttgactttcgtagtt
gcatctacaagacctgcaggacctgttgttgtcactaaagatactgatatcgtcatcaag
gaaaaatcagctgaggagatccgggttccagaaggcatttcatatgaggatatcggtggg
cttagaagggaaattcaactggtcagagaaatgattgagttgcctttgagacatcctgaa
ctcttccagaagcttggaattgagccccctaaaggtgtactgcttcatggacctccaggc
acgggcaaaacactgattgcaaaggcagttgcaagtgaaaccgatgcaaatttcattact
attagcggtcctgaaatcgtttccaagtattacggagaaagcgagcagaagcttcgcgag
attttcgaggaagccgaaaaggaagcaccttccatcatctttatagacgagatcgattcc
atagcccccaagcgcggtgaagtcacaggcgaactggaacgcagagtagttgcccagttg
ctctcacttatggacgggctaaactccagaggcgaagtagttgtaattgctgccacaaac
cgcccgaactcaatagatgaagctctccgccgtggcggaagatttgacagggaaatagaa
atcggaattcccgatcggaatggcaggaagcagattcttctcattcacaccagaggtatg
cctattcaggatgtaagccttagtgaaattgcagatgtaactcatgggtttgtaggcgct
gatctgtcttctctctgtaaagaagcagcaatgcatgctctcagaaggataactcctgaa
atcgatatcgaagaagacgaaattccacaggaaattcttgataaactagtggtcaccaaa
gatgatttcaaggaagctctgaagaatatcgagccgtctgcaatgagggaagtttatgtt
gaggttccgcatgtaggatgggaggatatcggaggacttgaaaatgcaaagcaggaactt
attgaggctgttgagtggcccctgaagtatcctgaactctttagcagtatcaatataaaa
cctcccagaggcgtattattatttgggcccccgggtacaggtaaaaccttgcttgcaaag
gccgttgccagtgaaagcgaagccaatttcattagcattaaaggtccagaacttctcagc
aagtatgtgggagaatccgagcgtgcggttagggaaacctttaggaaagccaaacaggct
gcaccgactgttgtcttctttgacgaaatcgattcaattgcccctcaaagaagttctgtt
tcagatacgcatgtatccgaaagagttgtcagtcagatcctcactgaattggatggagta
gaggaactcaaggatgtaattattgttgcggccacaaaccggcctgatatggtagaccct
gcgcttctcagacctggccgctttgacaggctcatctatatcaagccaccagataacata
agcagggaaaagatctttgagatccatacgcagggaaaaccccttgcagaagatgtaaat
ctttctgagcttgctgatatgactgaagggtatgtgggagcagacatcgagggtatttgc
agagaggctgcgatgctggccctgagggaaatagttaccccaggagctagcagaaaggat
atcgagaaacgggcaggagaagtcataatttcaaagaagcactttgaacgtgcaatccgc
cgtgtaaagcctacaacatccagggaaagccttgcggcttatgaacggagtgctgaactc
tttgctaaatacgcaactgaatttgaagaagaagctcccgaggctgaagaacaggaaaaa
gaactcgaacatgaaaatgttccggatttctttcaggctcagtaa
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