KEGG   Methanosarcina barkeri Wiesmoor: MSBRW_0090
Entry
MSBRW_0090        CDS       T03839                                 
Name
(GenBank) Cell division protein FtsH
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
mbw  Methanosarcina barkeri Wiesmoor
Pathway
mbw04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mbw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    MSBRW_0090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mbw03019]
    MSBRW_0090
   03009 Ribosome biogenesis [BR:mbw03009]
    MSBRW_0090
   04131 Membrane trafficking [BR:mbw04131]
    MSBRW_0090
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mbw04147]
    MSBRW_0090
Messenger RNA biogenesis [BR:mbw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     MSBRW_0090
Ribosome biogenesis [BR:mbw03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    MSBRW_0090
Membrane trafficking [BR:mbw04131]
 SNARE
  SNARE associated proteins
   Others
    MSBRW_0090
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    MSBRW_0090
Exosome [BR:mbw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSBRW_0090
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 CDC48_2 RuvB_N AAA_2 AAA_5 TIP49 AAA_14 AAA_22 AAA_33 nSTAND3 AAA_28 Vps4_C Sigma54_activat ABC_tran AAA_7 AAA_3 AAA_17 IstB_IS21 Mg_chelatase RNA_helicase NPHP3_N AAA_18 Zeta_toxin ATP-synt_ab TsaE AAA_24 DUF815 Parvo_NS1 PhoH NB-ARC SLFN-g3_helicase AAA_30 AAA_11 AAA_lid_PRS2_C
Other DBs
NCBI-ProteinID: AKB49343
UniProt: A0A0E3QI35
LinkDB
Position
89609..91873
AA seq 754 aa
MIEEINLRVAEAYHKDVGRGIARIDTRLMQQMGLVSGDIIEISGRAKTYAIVWPNVEREQ
ENRIRIDGNLRSNAKVGIDDRVTIQKVQAKNAQRVTLAPSQPVRLVGGAHYILRIIEGRP
LNKGQQIRVETVNNPLTFVVASTRPAGPVVVTKDTDIVIKEKSAEEIRVPEGISYEDIGG
LRREIQLVREMIELPLRHPELFQKLGIEPPKGVLLHGPPGTGKTLIAKAVASETDANFIT
ISGPEIVSKYYGESEQKLREIFEEAEKEAPSIIFIDEIDSIAPKRGEVTGELERRVVAQL
LSLMDGLNSRGEVVVIAATNRPNSIDEALRRGGRFDREIEIGIPDRNGRKQILLIHTRGM
PIQDVSLSEIADVTHGFVGADLSSLCKEAAMHALRRITPEIDIEEDEIPQEILDKLVVTK
DDFKEALKNIEPSAMREVYVEVPHVGWEDIGGLENAKQELIEAVEWPLKYPELFSSINIK
PPRGVLLFGPPGTGKTLLAKAVASESEANFISIKGPELLSKYVGESERAVRETFRKAKQA
APTVVFFDEIDSIAPQRSSVSDTHVSERVVSQILTELDGVEELKDVIIVAATNRPDMVDP
ALLRPGRFDRLIYIKPPDNISREKIFEIHTQGKPLAEDVNLSELADMTEGYVGADIEGIC
REAAMLALREIVTPGASRKDIEKRAGEVIISKKHFERAIRRVKPTTSRESLAAYERSAEL
FAKYATEFEEEAPEAEEQEKELEHENVPDFFQAQ
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgattgaagaaattaatttgagagttgctgaagcttatcataaggacgtgggcagggga
attgcaagaattgacactcgcttgatgcagcagatggggcttgtaagcggggacataatt
gagatttcagggagagcaaagacctatgcaattgtctggccaaatgtggagcgtgaacag
gaaaatcggatccggattgacggaaacttgcgcagtaatgccaaagttgggattgatgac
agggttacaatccagaaagtccaggcaaaaaacgctcagagagttacccttgctccttct
cagcctgtaagacttgttggaggggctcactacatccttagaattattgaggggagacct
ttgaacaaaggtcagcagatcagggtggaaactgtaaataaccctttgactttcgtagtt
gcatctacaagacctgcaggacctgttgttgtcactaaagatactgatatcgtcatcaag
gaaaaatcagctgaggagatccgggttccagaaggcatttcatatgaggatatcggtggg
cttagaagggaaattcaactggtcagagaaatgattgagttgcctttgagacatcctgaa
ctcttccagaagcttggaattgagccccctaaaggtgtactgcttcatggacctccaggc
acgggcaaaacactgattgcaaaggcagttgcaagtgaaaccgatgcaaatttcattact
attagcggtcctgaaatcgtttccaagtattacggagaaagcgagcagaagcttcgcgag
attttcgaggaagccgaaaaggaagcaccttccatcatctttatagacgagatcgattcc
atagcccccaagcgcggtgaagtcacaggcgaactggaacgcagagtagttgcccagttg
ctctcacttatggacgggctaaactccagaggcgaagtagttgtaattgctgccacaaac
cgcccgaactcaatagatgaagctctccgccgtggcggaagatttgacagggaaatagaa
atcggaattcccgatcggaatggcaggaagcagattcttctcattcacaccagaggtatg
cctattcaggatgtaagccttagtgaaattgcagatgtaactcatgggtttgtaggcgct
gatctgtcttctctctgtaaagaagcagcaatgcatgctctcagaaggataactcctgaa
atcgatatcgaagaagacgaaattccacaggaaattcttgataaactagtggtcaccaaa
gatgatttcaaggaagctctgaagaatatcgagccgtctgcaatgagggaagtttatgtt
gaggttccgcatgtaggatgggaggatatcggaggacttgaaaatgcaaagcaggaactt
attgaggctgttgagtggcccctgaagtatcctgaactctttagcagtatcaatataaaa
cctcccagaggcgtattattatttgggcccccgggtacaggtaaaaccttgcttgcaaag
gccgttgccagtgaaagcgaagccaatttcattagcattaaaggtccagaacttctcagc
aagtatgtgggagaatccgagcgtgcggttagggaaacctttaggaaagccaaacaggct
gcaccgactgttgtcttctttgacgaaatcgattcaattgcccctcaaagaagttctgtt
tcagatacgcatgtatccgaaagagttgtcagtcagatcctcactgaattggatggagta
gaggaactcaaggatgtaattattgttgcggccacaaaccggcctgatatggtagaccct
gcgcttctcagacctggccgctttgacaggctcatctatatcaagccaccagataacata
agcagggaaaagatctttgagatccatacgcagggaaaaccccttgcagaagatgtaaat
ctttctgagcttgctgatatgactgaagggtatgtgggagcagacatcgagggtatttgc
agagaggctgcgatgctggccctgagggaaatagttaccccaggagctagcagaaaggat
atcgagaaacgggcaggagaagtcataatttcaaagaagcactttgaacgtgcaatccgc
cgtgtaaagcctacaacatccagggaaagccttgcggcttatgaacggagtgctgaactc
tttgctaaatacgcaactgaatttgaagaagaagctcccgaggctgaagaacaggaaaaa
gaactcgaacatgaaaatgttccggatttctttcaggctcagtaa

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