Methanosarcina barkeri Wiesmoor: MSBRW_0096
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Entry
MSBRW_0096 CDS
T03839
Name
(GenBank) Ribulose-1,5-bisphosphate carboxylase, Type III
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw00630
Glyoxylate and dicarboxylate metabolism
mbw00710
Carbon fixation by Calvin cycle
mbw01100
Metabolic pathways
mbw01110
Biosynthesis of secondary metabolites
mbw01120
Microbial metabolism in diverse environments
mbw01200
Carbon metabolism
Module
mbw_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSBRW_0096
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
MSBRW_0096
Enzymes [BR:
mbw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MSBRW_0096
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AKB49349
UniProt:
A0A0E3QI40
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All DBs
Position
100712..101998
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AA seq
428 aa
AA seq
DB search
MQRDYIDAGYSPKDTDLICEFHIEPSAGVNFEEAATHMAGESSIDSWTEIATLSPELAAR
LKPHVFYMDEDAQTVRVAYSEELFELGSVPQVLSAVAGNILSMKIVDNLRLQDIAFPKSM
LREFKGPGFGLSGIRELTGVQDRPLIGTIVKPKVGLTSEKHAEVAYNSFAGGCDLVKDDE
NLTDQKFNKFEKRAELTLKLAEKAESETGERKMYLCNITAPTCKEMIRRMNILKDLGASY
AMIDIVPAGWTALQTLREEADDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLD
QLHIGTVVGKMHGEKHEVLSLRDECVLDNVPADESQHVLAQDWGGLKPMFPVASGGLAPT
MIPDLYTIFGRDVIMQFGGGIHAHPMGTKAGAAACRQALEASLEGVSLQEYAKNHRELEA
AINKWLKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagggattatatagacgcgggctacagcccgaaggatactgatcttatctgtgaa
tttcatatcgaaccgtcagcaggagtgaattttgaggaagctgcaacccatatggcaggg
gaaagttctatagattcctggactgaaattgctacgctgagtcccgaacttgcagccagg
ctaaagccacatgttttttacatggatgaggacgcacagaccgtaagggtagcttattcg
gaagagctctttgaacttggttcggttccgcaggtactcagtgcagttgcaggaaatatc
ttgagtatgaaaatcgttgacaatctcagactccaggatatagctttcccgaagtcaatg
cttcgagaattcaaaggtcctggattcgggttgtcaggaatcagggaacttacaggtgtg
caagacaggcctctcataggaactattgtcaagccgaaagttggattaacctccgaaaaa
catgctgaggttgcttacaattcctttgcaggaggctgcgaccttgttaaagatgatgag
aaccttacggatcagaaatttaacaaatttgaaaaaagagctgaacttaccctgaagctt
gcagaaaaggcagaatctgagaccggagagcgtaaaatgtatctctgcaacattactgcc
cctacctgtaaggaaatgatccgccgcatgaacatccttaaagacctgggtgccagctat
gcaatgatcgacatcgtacctgccggctggactgcacttcagaccctgagggaagaagca
gacgatgcaggactagctctccacgctcaccgatgcatgcattcagcctataccaggaac
ccgcgacacggaataagcatgcttgtagttgccaagctctgcagattgatcgggcttgac
cagcttcacataggtacggttgttgggaagatgcacggagaaaaacacgaggttctgtct
ctccgtgacgagtgtgtgctagacaatgtgcctgcagatgaaagccagcatgtccttgct
caggactggggagggttgaagcccatgtttccggttgcttccggaggtcttgcccctact
atgattcctgacctgtacactatctttggaagagatgttattatgcaatttggtggtggg
attcacgctcatccaatgggaacaaaagctggagccgctgcttgcagacaggcactcgaa
gcatctcttgaaggagttagcctgcaggaatatgcgaaaaaccacagagaacttgaagcc
gccatcaataagtggctgaagaaataa
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