KEGG   Methanosarcina barkeri Wiesmoor: MSBRW_0119
Entry
MSBRW_0119        CDS       T03839                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mbw  Methanosarcina barkeri Wiesmoor
Pathway
mbw03030  DNA replication
mbw03410  Base excision repair
mbw03420  Nucleotide excision repair
mbw03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mbw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSBRW_0119
   03410 Base excision repair
    MSBRW_0119
   03420 Nucleotide excision repair
    MSBRW_0119
   03430 Mismatch repair
    MSBRW_0119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbw03032]
    MSBRW_0119
   03400 DNA repair and recombination proteins [BR:mbw03400]
    MSBRW_0119
DNA replication proteins [BR:mbw03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSBRW_0119
DNA repair and recombination proteins [BR:mbw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSBRW_0119
   MMR (mismatch excision repair)
    Other MMR factors
     MSBRW_0119
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSBRW_0119
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1
Other DBs
NCBI-ProteinID: AKB49372
UniProt: A0A0E3QHV4
LinkDB
Position
complement(131616..132353)
AA seq 245 aa
MFKAAINAELLKDAVAALAVIVDEVRFKINPEGISVKAVDPANVAMGIFELGSSAFDEYN
ADECEIGVDLNKITDLLGIADKNDTVRMELEEENHKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSDDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGKDFPILIDFEIANGSGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtttaaggcagcaattaatgcagagcttctgaaagacgcggttgccgcactagctgta
attgtagatgaggtcagattcaagataaaccctgaaggtatttcggtaaaagccgttgac
cctgccaatgttgcaatgggaattttcgaacttggatcatctgctttcgacgaatataat
gctgatgaatgtgaaattggagtcgacctgaataagattacggacctgctgggaattgcg
gataagaatgacacagtccggatggaacttgaagaagaaaatcacaaactcttgattgat
gtcggagggctgtcttatacactttctcttctcgatccttccacaattcgggcagaacca
agagttccacagctcgaattgcctgccaaagtcgtccttaacggtgcagacctcagacgt
gctgttaaagctgccgaaaaaataagcgaccatatgcttatgggagtttcggacgataca
ttctatatggaagcaaaaggcgataccgaccaggttcgtctcgagatgggcagggaccag
ctaatcgatctgaaggcaggcgaagcatgttctcttttctctctggattatctgaccgat
atagtcaaacccacaaacaaagtcaatgaagttactctgtcccttggaaaagacttccca
atactcatagatttcgaaattgcgaatggttcaggaaggatttcttacctcctggctcca
agaattgagtcggactga

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