Methanosarcina barkeri Wiesmoor: MSBRW_0193
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Entry
MSBRW_0193 CDS
T03839
Name
(GenBank) Chitin binding protein
Organism
mbw
Methanosarcina barkeri Wiesmoor
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Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
NosD
Beta_helix
InlK_D3
MG2
ChitinaseA_N
Big_13
Fimbrial_K88
CNRIP1
Bact_surface_Ig-like
Motif
Other DBs
NCBI-ProteinID:
AKB49446
UniProt:
A0A0E3LKF8
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Position
complement(214001..216208)
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AA seq
735 aa
AA seq
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MEGGIKIKKLTTLIVAIFILSLISSLGAATEIIVQPGDSIQNAVNSSSSGDIITVKPGTY
TENIIVAKNDLTIRSESGNPDNTMIKAKSSGASVLLLQGNNIKITGFKTVGATRSGNAGI
CLSSCSNCIVENNELLNNCYGTYLLRSKENKISKNTATNNREYGIVLGTATDNTLSGNTA
FGNGRGIHVGNSDGNTFSGNTIQDNSVYGLYVCPRSDTNHIYNNYFNDNSMTIRNGIGNT
YYTKKTAGTNIVGGPYIGGNFWGKPDGTGFSNTAVDKNRDGISDSPYKNITGSICSDNLP
LVVYKSGSIKPVAAFSASPTSGRAPLKVKFTDKSTGSPTKWKWDFGDGSKSFLQNPTHKY
SKEGKYTVTLKVTNAAGINTATKSKYITVTKKPVAAFYASPTSGKVPLKVKFTDKSTGSP
TKWKWDFGDGSKSFLQNPTHKYSKEGKYTVTLKVTNALGINTATKSKYITVTKKPVAAFY
ASPTSGRVPLKVKFTDKSTGSPTKWKWDFGDGSKSFIQNPTHKYSKEGKYTVTLKVTNAA
GINTATKSKYITVTETSQTSTTALSASPTPTAALSASPKSGNAPLNVTFTDKSTGSPTKW
KWDFGDGETSTTKNPTHEYSATGKYTVTLTAGNAAGSNTTTKSKYIIVTETSQAPVADFW
GSTLSGNAPLNVTFTETSKGSPTSWKWDFGDGTSSTEKSPTHTYSAAGTYTVKLTSTNAA
GNSTKTKSNYIKVAK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagggattaaaataaaaaaattgaccactttgatagtagctattttcatatta
tcattaatatcaagtcttggagctgcaactgagattatagtgcagccaggagattctatt
caaaatgctgtgaatagttcgtcttccggcgatataattaccgtaaaacccggaacctat
actgaaaatatcatagtagctaaaaatgatcttacaatccggtcagaatccggaaaccct
gataatacgatgatcaaagccaaaagttcaggggccagtgtgctcctcctgcagggaaac
aacataaaaataactggatttaagactgtaggagcaacccggtctggcaatgcaggaatc
tgtctgtcttcgtgtagtaactgcatagttgagaacaatgaacttttgaacaactgttac
ggaacctatctcctgcgttccaaagagaataaaatctcaaagaatacagctacgaacaat
agggaatatggaattgtactggggactgctacagacaataccctttcaggaaatacggct
tttggtaacggtcgtgggatccatgttggtaactctgacggcaacacattctcaggcaat
accattcaagataatagtgtttatgggctttatgtctgtcctagaagcgacactaatcac
atttacaacaattacttcaatgacaatagtatgactattagaaatggaatcggaaatacc
tattataccaaaaaaaccgcaggtactaatattgtgggtggcccttatataggaggcaac
ttctggggaaaacctgatggtacaggattttccaataccgcagtagataaaaacagggat
ggaatttccgattctccatataaaaacataacaggcagcatttgttcagataaccttcct
ctagttgtttataaatctggatcaataaaacccgttgctgcattctctgcatctcctact
tcaggaagagcaccattaaaagttaaatttactgacaaaagtacaggatcaccaaccaaa
tggaaatgggattttggagatggatcaaagtcattccttcagaatcctacgcataaatat
tccaaagaaggaaaatacacggtaaccctcaaagtaaccaatgcagcaggcatcaacaca
gcaacaaaatcaaagtatatcacagtgacaaaaaaacccgttgctgcattctatgcatct
cctacttcaggaaaagtgccattaaaagttaaatttactgacaaaagtacaggatcacca
accaaatggaaatgggattttggagatggatcaaaatcattcctacagaatccaacgcat
aaatattccaaagaaggaaaatacacagtaacactaaaagtaaccaatgcgctaggcatc
aacacagcaacaaaatcaaagtatatcacagtgacaaaaaaacccgttgctgcattctat
gcatctcctacttcaggaagagtaccattaaaagttaaatttactgacaaaagtactgga
tcaccaaccaaatggaaatgggattttggagatggatcaaagtcattcatacagaatcca
acgcataaatattccaaagaaggaaaatacacagtaacactaaaagtaaccaatgcggca
ggcatcaacacggcaacaaaatcaaagtatatcacagtgacagaaacttcgcaaacttcg
actactgcactttctgcatctccaactccgactgctgcactttctgcatctccaaaatca
ggaaatgccccattaaacgttacttttactgacaaaagtacaggatcaccaactaaatgg
aagtgggattttggagacggagaaacttcaacaactaaaaacccaactcatgagtattca
gccacaggaaaatacacagtaacactgacagcaggcaatgcagcaggtagtaacacaaca
acgaaatcaaagtatattatagtaacagaaacttcccaagctcctgttgcagatttttgg
ggctcgacgctctcaggaaacgctccattaaatgtaacatttacggagacaagcaaagga
tcaccaacttcgtggaaatgggattttggagatgggacatcgtcaacagaaaagagtcca
acacacacatattcagctgcaggaacttacacggttaaacttacatcaacaaatgcagca
ggaaatagtacaaaaacaaaatcaaattatataaaagtggcaaagtga
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