Methanosarcina barkeri Wiesmoor: MSBRW_0406
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Entry
MSBRW_0406 CDS
T03839
Name
(GenBank) Thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw00730
Thiamine metabolism
mbw01100
Metabolic pathways
mbw01240
Biosynthesis of cofactors
Module
mbw_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MSBRW_0406
Enzymes [BR:
mbw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
MSBRW_0406
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
AKB49659
UniProt:
A0A0E3QIH1
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Position
complement(471336..472622)
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AA seq
428 aa
AA seq
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MTIVEDAQKGIITEEMKIVAKDEGLDPEFIRRGVAAGRIVIPTSPYRQVKICGIGEGLRT
KVNASIGVSSDIVDADMEVKKAQAAEAAGADTLMELGTGGDFLAIRKKVIDSISLSVGSV
PLYQAFIEAARKYGSIVDMTEDELFKATEDQAKLGTNFMAIHTGINNITMDRLKAHGRYG
GLCSRGGAFMTSWMLHNEKENPLYANFDYLVEILKEHEVVLSTGNGMRAGAVHDATDRAQ
IQELIINSELADRAHKQGVQVIVEGPGHVPLDQIGTNVKLMKEMSGHKPFYMLGPLVTDI
APGYDHIVTAIGASVSASYGCDFLCYVTPAEHLALPNLEDVITGVKTSKIAAHVGDMVKY
PDRAREQDLAMGRARRDLDWQKMYSLAIDPEHAKEVRNSRAPEDSDACTMCGNFCALKIV
NQNYNLAK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtggaagatgcacaaaaagggattattactgaagaaatgaagattgttgca
aaggacgaaggacttgaccctgaattcatccgtcgtggtgttgcagccggaagaattgtt
attccaacctccccatacaggcaggtaaagatctgcggtataggagaagggctcaggacc
aaagtcaatgcatccatcggtgtatcctcggatattgttgatgcagacatggaagttaaa
aaagcacaggctgccgaagctgcaggtgcagacacccttatggagctcggaactggtgga
gacttccttgcaatcaggaaaaaagtcattgacagtatttccctttcagtcggttcagtg
cctctttaccaggccttcattgaggccgcaaggaaatacggctcaatcgtggatatgacc
gaagacgaactcttcaaggcaaccgaagaccaggcaaagctcggaactaatttcatggca
attcacacaggaatcaacaatatcaccatggaccgccttaaagcccatggcaggtacggt
ggcctctgttcccgtggtggcgcctttatgacttcctggatgctccacaatgaaaaggaa
aatccactttatgcaaactttgattaccttgttgagatcctcaaggaacacgaagtagtc
ctctctaccggaaacggtatgcgtgcaggtgcagtccacgatgcaaccgaccgtgcccag
atccaggaattaattattaactccgaactggccgacagagcccacaagcagggtgtgcag
gtcattgtcgaaggtccgggtcatgtccctctcgaccagataggaaccaacgtaaaactc
atgaaggaaatgagcggtcacaagccattctacatgctcggcccacttgtaactgacatc
gcaccaggttacgaccacatcgtaactgcaatcggagcatcggtttctgcttcatatggc
tgtgacttcctttgctatgtaactcctgcagagcaccttgcccttccaaaccttgaagat
gttatcacaggagtcaaaacctcaaagattgcagctcacgtaggcgatatggtaaaatat
ccagacagggcaagagaacaggaccttgctatgggcagagctagaagagacctcgattgg
caaaagatgtactctcttgcaatcgacccagaacacgcaaaagaagttaggaacagcagg
gctcccgaagattctgacgcctgcacaatgtgcggtaacttctgcgccctcaagatcgta
aaccagaactacaacctcgcaaaataa
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