Methanosarcina barkeri Wiesmoor: MSBRW_0411
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Entry
MSBRW_0411 CDS
T03839
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
mbw
Methanosarcina barkeri Wiesmoor
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mbw03036
]
MSBRW_0411
Chromosome and associated proteins [BR:
mbw03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
MSBRW_0411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_29
AAA_21
Crescentin
Motif
Other DBs
NCBI-ProteinID:
AKB49664
UniProt:
A0A0E3QGH5
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All DBs
Position
complement(477009..480536)
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AA seq
1175 aa
AA seq
DB search
MYIKEIEFVNFKSFGKKVKIPFYNDFTTISGPNGSGKSNIIDGILFALGLTSSRTLRAEK
LTDLIYNGDASKKPDFAQVTIRFDNSDHKLPLELDEIEVSRKVRRTKNGYYSYFYFNGKS
VSLGEVHSQLEKAGITPEGYNVVMQGDVTQIISMTSVERRKIIDEIAGVAEFDERKQKAL
GELEVVKQQIERVDIILEEVRTQLGKLAGERDQALKYQALKTEKVKFEGYLLLSKLKDAR
AELQNVEKEITGKEEHLEKVQIVLNERTKELQALEETLEKLSVEIRKKGEDEQLQVKREI
EETKGEISRCVDSIELSESELEEADSRRRKAFVEIDSTKGNVEELKEKIEAENLRKESIS
SELSERKTERMLLQSRIADVDAKFAATRDELMAARKKLEDAKNEKNELIRTEDRLLDTLR
RKSLELREIENQIKDAEAAVATSDSDTLSVRYELEKLSENLESLIRDRDDIESSHFRIKE
DIKKLENRLHGLQQEYTITETRVRASEQGRGYSRAVEMIIGAARQEDLFGINGTIAQLGR
VERQYSTALEVAAGNRMQAIVVDTDADAAEAIEYLKRRKGGRATFLPLNKLREPRRLENL
SYENGVIGYAIDLIQFDSGFEPAFWYVFQDTLVMENLESARRLMGKARMVTLEGELLEKS
GAMVGGSISSKSGTSFAAAEKDKLLELAEKIRSLDESRNAAINKQDSIESHLFELSRKIR
DCEATISRKESQLDEIAGREAKLAELLEAKQADLKAIEESRTELGTEMDRVTAEKADKEK
VVSELEEQISGLEAKLADSPLPEINKKIEFVDEELRRLDGRIRDTEATLNALKLEKEYAE
QKIAEAKELIREIDEKKASRMEKVNSLKIKIKECEEKLEEKKAREIELSNELIGLQQERE
KVQAEHNAVKRRVSISSTTLEKAKQQVLTLKATKNALLDQEKQFVEEILKRGIEETDEVP
NYETVYMRIQAIDEALRRLEPVNMRAIDEYNEVELRLSDLQGKRDTLFTEREQLLERIDQ
YEHLKRDAFMEAYTSINANFKEIFHELSDGMGELLLDNPDDPFAGGMTLRAQPKEKTLQR
IEAMSGGEKSLTALAFIFAIQQYRPAPFYAFDEIDMFLDGWNVERVSRRVKTSGSKVQFI
VVSLRKPMIQAASRTIGVTMQENNLTSITGVKLNG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
gtgtatataaaagagattgaatttgttaattttaagtctttcggaaaaaaagtaaagatt
cccttttataatgactttactacaatttcaggtccaaacgggagtgggaagtctaacata
atagatgggattctttttgcactcgggctcacaagttcaaggacccttcgcgctgaaaaa
cttaccgatttgatttacaacggcgatgcgtcaaaaaagcctgattttgctcaggttact
atccgttttgacaactcggaccataagttacctctagagcttgacgagattgaagtctca
agaaaggttcggcggacaaaaaacgggtattacagctatttttatttcaatggaaaatcc
gtaagccttggagaagtccattctcagcttgaaaaagccgggataacgcctgaaggctat
aatgtggttatgcaaggagatgtaacgcagataatctccatgacctctgtagaaagaaga
aagattatagacgaaattgcaggggttgcagaatttgacgaacgcaagcaaaaggcgctt
ggggaactggaagtcgtaaaacagcaaatcgagcgcgtggatataatccttgaagaggta
cgcacccagctaggaaaactggccggagaacgtgaccaggctttaaaataccaggctctc
aagactgaaaaagtaaaatttgaaggatatctcctactttccaaactcaaggacgcaagg
gctgaactgcagaatgtggagaaggaaatcacaggcaaagaagagcatcttgaaaaagtc
cagattgtcctcaacgagagaacaaaggaacttcaggcgcttgaagaaaccctggaaaaa
ctttcggttgaaatccgaaaaaaaggagaggatgaacagcttcaggtaaagagggagatc
gaagagacaaagggagaaatttctcgctgcgtagatagtatcgagctttcggaatccgaa
cttgaggaagctgattcgaggcgcaggaaagcctttgtagagatcgattccaccaagggc
aatgttgaggaactcaaagaaaaaattgaagccgaaaacctgagaaaagaaagcatttct
tcagaactttccgagcgcaaaaccgaacgcatgctgcttcagagcagaattgcagatgtg
gacgcaaaatttgctgctacgcgggatgagctcatggctgccaggaagaagcttgaggat
gcaaaaaacgagaaaaatgaattaatccgaaccgaagatcggctccttgataccctccgg
agaaaatctttagaactccgagagatagaaaaccagatcaaagatgctgaagccgcggtt
gctacttctgatagtgatacgctttctgtcaggtacgagcttgaaaagctttctgaaaac
ctggaatctcttatccgggaccgtgatgatattgaaagcagccatttcaggataaaggaa
gatataaagaaacttgagaacaggcttcacggcctccagcaggagtatacaattacggag
acaagagtgcgggcatcggaacagggcagaggctattccagagctgtggagatgataata
ggggctgcaaggcaggaagaccttttcggaattaatgggaccattgcccagcttggaaga
gtggaaaggcaatactcaacagctctggaggttgctgcgggaaaccgaatgcaagcgatt
gttgtggatacggacgccgatgctgccgaagcaatcgaatacctgaagcggagaaaagga
gggcgagcaacctttcttcctctcaacaaactgagagagcccaggcggcttgaaaatcta
agttacgaaaacggagtaataggatacgcaattgaccttattcagtttgattccggtttt
gagcccgctttctggtatgtttttcaggatactcttgtcatggaaaaccttgaaagtgct
cgccgcctcatgggaaaagcaagaatggtaacccttgaaggtgaacttcttgaaaagagt
ggagcaatggtaggagggtcaatatcctctaaatcgggcacttcttttgcagccgcagaa
aaagataaactgcttgagcttgcagagaagatcaggtccctggatgaaagccggaatgcg
gcaataaacaagcaggacagcattgaaagccatcttttcgaactgagcagaaaaattcgg
gactgtgaggctacgatctcacgaaaagagagccagcttgatgaaattgcaggcagggaa
gcaaaacttgctgaacttcttgaagcaaaacaggccgaccttaaagcaattgaggagtcc
agaaccgaactcggaactgaaatggatagggtaactgcggaaaaagctgacaaagagaag
gttgtatccgaacttgaggagcagatctcaggacttgaagcaaaacttgcggattctccc
ctgcctgaaatcaataaaaagatagaattcgtcgatgaggaactccgcaggctggatggc
cgaatccgggatactgaagccacattgaatgccctgaagcttgaaaaagagtatgctgaa
cagaaaattgccgaagcaaaggaacttatcagggaaattgatgagaagaaagcttcaaga
atggaaaaagttaactctctgaagataaaaataaaggaatgtgaggaaaaacttgaggaa
aaaaaagccagggaaattgagctttcgaatgaactgatagggctccagcaagaacgggaa
aaggttcaggctgaacacaatgcggtcaaacgcagagtaagtatttcctcaactacgctt
gaaaaggcaaagcagcaggtgcttacgctgaaagctacgaaaaatgcgcttttagatcag
gaaaagcaatttgtcgaagaaatactcaaaagaggcatagaggagactgatgaggttccg
aattacgaaaccgtttacatgcggattcaggcaatcgatgaagccctacgaaggctcgaa
cccgtaaacatgagagcaattgacgagtataatgaggtagagttaagactttcggatttg
caaggaaaacgtgacactctctttaccgagagagagcagctccttgagcgcatcgaccag
tatgagcatttaaaacgagatgcctttatggaggcctatacaagcattaatgccaacttc
aaggagattttccatgagctttccgacgggatgggtgaactcttgcttgataaccctgat
gacccttttgcaggagggatgacacttagggcacagcccaaggaaaaaactctccagcgg
atcgaggcaatgtccggaggagaaaaaagccttactgcacttgcgttcatattcgcaatc
cagcaataccgtcctgctcccttttatgcctttgacgaaattgatatgtttcttgacggc
tggaatgtggaaagagtttcaaggcgcgtaaaaacctcaggatcaaaagtccagtttatt
gttgtttccttaagaaaacctatgatccaggctgcatccaggacaataggagttacaatg
caggaaaataacctcacgagcattaccggggtgaaacttaatggctga
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