Methanosarcina barkeri Wiesmoor: MSBRW_0460
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Entry
MSBRW_0460 CDS
T03839
Name
(GenBank) hypothetical protein
Organism
mbw
Methanosarcina barkeri Wiesmoor
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
TIR_2
NB-ARC
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
APAF1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
WHD_APAF1
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
TIR
ThsB_TIR
CFAP251_N
Beta-prop_Vps41
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
DSE1_N
Beta-prop_EML
ASA1
Beta-prop_SPT8
AAA_22
NACHT
Beta-prop_WDR41
HGTP_anticodon
WHD_Dark
Beta-prop_SCAP
WDR90_beta-prop_4th
AAA_16
Nucleoporin_N
Motif
Other DBs
NCBI-ProteinID:
AKB49713
LinkDB
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Position
complement(536277..539186)
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AA seq
969 aa
AA seq
DB search
MKSTAEDLINGEISSVGVYLYNKLKNYVFEKESSEKTAIRKADFGKIIEEKTDLEEFPAV
SKEDIKAICEILYNSKDIEIIIKQLYVFQSDINKSLDEIKEDFVSLFPKTINLENGRINL
ETGERISFLLKIFEVLDEGIQTALNRAVDEGSSGASNALSNRRHFDMKNKLANGFKEVKK
LINESSRAVQEKKIPTEKLPSLFISYAREDDEPFVEKLYQGLKEKGFEIWWDRTAMKNRG
RTFLQEIRDAIEDSDLLIAVIGPKAIESDSVRYEWEHALLFSKGVIPVLRMGDYNLLLPE
MSKLHCPDFREKRPYEEALEELIRLLKEPIPSLGPIIGIPSLPPNHLPRKNDLNIIKEII
LADTVKPVVITSTKQVTALQGMGGMGKSVLSAAFARSAETRRAFYDGIFWITVGLEASES
DASGNMRLIGTNLGDDPVNYSSKKEAEASLSKMLSDKVCLIILDDVWKVPQATPFFNALG
SRCRLLITTRNDDVVTSLGAQKHEIKVLGKPEALKLLANWCEQEIDSLTSKAAEVARECG
YLPLALSICGAMAKSGISWTYILEALQEADLEFIEAQLPNYPDPNVGRALKVSVDFLSLE
DPNAVMRYQELVIFPEDELVPETTIAMLWEHTGNLKRRNVEKLLTKLKDRSLLRLDGEAP
NRLISLHDLQLDYLRATVGDLTSLHNKLLAAYGKECGNKWSNGSEDGYFFEHLAYHMKEA
GRREELHKLLLDFEWMCKKIKCVRLMQEKDGKGIPDLNSLLHDYEFLSNEPKIELVKEAI
QLSFDIIAKDEAQFSGQLIGRLQVFNQNEEIRLLLDQATQWKEEDVRLIPLQPCLKPPGG
SLKRTFKAHAHPINDVVITSNGKVAISASTDKTIRIWDLNEWIEKGTLKGHLTPVTAIAV
SLDGKYAASCSYHIMCLIGDNNIKVWDLEKREEKTTLKGHTHWVQTVAITPDGKYIVSGS
LDKTIKFGI
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctactgctgaagatttaataaatggggaaataagcagtgtaggagtttatcta
tacaacaaattaaagaattacgtttttgaaaaggagtctagtgaaaaaacagccattaga
aaagctgattttggaaaaataattgaagagaaaacagatttagaagagtttcctgcggta
tctaaagaggacataaaggctatttgtgagattttatacaactctaaagatatcgaaata
ataatcaagcaattatatgtgtttcagagtgatattaacaaaagccttgatgaaatcaag
gaagattttgtatcgttatttcccaagacaataaatctagaaaatggaagaataaatctg
gaaactggggaaagaatttcttttttacttaagatatttgaggtactagacgaaggaatt
caaactgctctaaacagggcagtagatgagggatcttcaggtgcctctaacgcactctcc
aaccgtcggcactttgatatgaaaaataaattagcaaatggattcaaagaagttaaaaag
cttataaacgagagctccagagcagttcaagaaaagaaaatcccaactgaaaagttaccg
tccttatttatttcgtatgcccgagaagatgacgagccatttgtggaaaaactctaccag
ggtctgaaagagaaaggttttgagatctggtgggatagaaccgccatgaaaaatcgcggc
agaacttttttgcaggaaataagagatgcaattgaagattcagacctattgattgccgtt
ataggacctaaagcaattgaatctgattctgttcgatatgaatgggaacatgcccttctt
tttagtaaaggtgtgattccagttttgcgtatgggtgattataacttacttcttcctgaa
atgtcaaaattacactgcccggattttcgagaaaagcgtccttacgaggaggcactcgaa
gaacttatccggcttttaaaagagcctattccttctcttggcccaataattggaattccc
tcgcttcctcctaaccacttacctagaaaaaacgatctcaatataattaaagaaataata
ttagctgacacagttaaacctgtggtaatcacatctacgaaacaagttactgcacttcaa
ggtatgggaggaatgggaaaatccgtattatcagcagcttttgcccgctctgcggaaact
cgtagagctttttatgatggaatattctggattactgttggattagaagcatcggaatct
gatgctagtgggaatatgagactgatcggaacaaatcttggagatgaccctgtaaattat
agtagtaaaaaagaagctgaagcgagtctttcaaagatgctatcagataaagtctgcctc
attatacttgatgatgtctggaaagttccacaagctacgcctttcttcaatgctttaggt
tcacgttgcaggctacttattaccacgcgaaatgatgacgttgtcacttctcttggagct
cagaaacatgaaataaaagtgctcggcaaacctgaagcattgaagcttctagcaaattgg
tgcgaacaggaaatagattcattgacatctaaggctgccgaggttgccagagagtgcgga
tacttaccacttgccctatccatatgcggtgcaatggctaaaagtggcatatcatggacg
tatatcctcgaagccttacaagaggctgatcttgaattcattgaagctcaattgccaaat
tatccagatcccaatgtaggcagagcattgaaagtcagtgtagattttctatcacttgaa
gatcctaatgctgtaatgcgttatcaggaattagtgatctttcctgaagatgaattagtg
cccgaaactacaattgcaatgctttgggaacatactgggaacctgaaaagacgcaatgtt
gaaaaactgctcactaaattgaaagatagatctcttctgcgacttgatggtgaagcccct
aatcgccttatatctctgcatgacctgcaattagattacttgagagcgacagtgggggat
ttaaccagtctccataacaagctgctggcagcatatggtaaagaatgtggcaataaatgg
agtaatggttctgaagatggctatttcttcgaacatcttgcataccacatgaaagaagct
ggaagaagggaagaacttcacaagctccttttagactttgagtggatgtgcaaaaagatc
aaatgtgttcgtttaatgcaggaaaaagatggaaaaggaatcccagatttaaattcccta
cttcatgattacgaatttctctctaatgaaccaaaaattgaacttgtgaaagaggcaatc
cagctttcttttgacattatagctaaagatgaagctcaattttctgggcaacttattgga
cgactgcaagttttcaatcaaaatgaagaaataagattattattggatcaagctactcaa
tggaaagaagaagatgtcagactaattcctcttcaaccttgcctaaaaccgcccggtggc
tcgctgaaaagaacttttaaggcacatgctcatccaataaatgatgtcgttatcacatcc
aatggaaaagttgcaatttcggcttcaacggacaaaaccattcgaatttgggatttgaat
gagtggatagaaaaggggacgttgaagggacatctcactcctgtaactgcaattgcggta
tcattggacggaaaatacgccgcttcttgttcttaccacataatgtgcttaattggagat
aacaacattaaggtttgggacttggaaaaaagagaagaaaaaacaactcttaaaggacac
acacattgggtccaaacagttgctattactccagacggaaaatatatcgtttctggatca
cttgataaaactattaaatttgggatttag
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