KEGG   Methanosarcina barkeri Wiesmoor: MSBRW_0460
Entry
MSBRW_0460        CDS       T03839                                 
Name
(GenBank) hypothetical protein
Organism
mbw  Methanosarcina barkeri Wiesmoor
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 TIR_2 NB-ARC Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st APAF1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 EIF3I WHD_APAF1 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st TIR ThsB_TIR CFAP251_N Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C DSE1_N Beta-prop_EML ASA1 Beta-prop_SPT8 AAA_22 NACHT Beta-prop_WDR41 HGTP_anticodon WHD_Dark Beta-prop_SCAP WDR90_beta-prop_4th AAA_16 Nucleoporin_N
Other DBs
NCBI-ProteinID: AKB49713
LinkDB
Position
complement(536277..539186)
AA seq 969 aa
MKSTAEDLINGEISSVGVYLYNKLKNYVFEKESSEKTAIRKADFGKIIEEKTDLEEFPAV
SKEDIKAICEILYNSKDIEIIIKQLYVFQSDINKSLDEIKEDFVSLFPKTINLENGRINL
ETGERISFLLKIFEVLDEGIQTALNRAVDEGSSGASNALSNRRHFDMKNKLANGFKEVKK
LINESSRAVQEKKIPTEKLPSLFISYAREDDEPFVEKLYQGLKEKGFEIWWDRTAMKNRG
RTFLQEIRDAIEDSDLLIAVIGPKAIESDSVRYEWEHALLFSKGVIPVLRMGDYNLLLPE
MSKLHCPDFREKRPYEEALEELIRLLKEPIPSLGPIIGIPSLPPNHLPRKNDLNIIKEII
LADTVKPVVITSTKQVTALQGMGGMGKSVLSAAFARSAETRRAFYDGIFWITVGLEASES
DASGNMRLIGTNLGDDPVNYSSKKEAEASLSKMLSDKVCLIILDDVWKVPQATPFFNALG
SRCRLLITTRNDDVVTSLGAQKHEIKVLGKPEALKLLANWCEQEIDSLTSKAAEVARECG
YLPLALSICGAMAKSGISWTYILEALQEADLEFIEAQLPNYPDPNVGRALKVSVDFLSLE
DPNAVMRYQELVIFPEDELVPETTIAMLWEHTGNLKRRNVEKLLTKLKDRSLLRLDGEAP
NRLISLHDLQLDYLRATVGDLTSLHNKLLAAYGKECGNKWSNGSEDGYFFEHLAYHMKEA
GRREELHKLLLDFEWMCKKIKCVRLMQEKDGKGIPDLNSLLHDYEFLSNEPKIELVKEAI
QLSFDIIAKDEAQFSGQLIGRLQVFNQNEEIRLLLDQATQWKEEDVRLIPLQPCLKPPGG
SLKRTFKAHAHPINDVVITSNGKVAISASTDKTIRIWDLNEWIEKGTLKGHLTPVTAIAV
SLDGKYAASCSYHIMCLIGDNNIKVWDLEKREEKTTLKGHTHWVQTVAITPDGKYIVSGS
LDKTIKFGI
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgaaatctactgctgaagatttaataaatggggaaataagcagtgtaggagtttatcta
tacaacaaattaaagaattacgtttttgaaaaggagtctagtgaaaaaacagccattaga
aaagctgattttggaaaaataattgaagagaaaacagatttagaagagtttcctgcggta
tctaaagaggacataaaggctatttgtgagattttatacaactctaaagatatcgaaata
ataatcaagcaattatatgtgtttcagagtgatattaacaaaagccttgatgaaatcaag
gaagattttgtatcgttatttcccaagacaataaatctagaaaatggaagaataaatctg
gaaactggggaaagaatttcttttttacttaagatatttgaggtactagacgaaggaatt
caaactgctctaaacagggcagtagatgagggatcttcaggtgcctctaacgcactctcc
aaccgtcggcactttgatatgaaaaataaattagcaaatggattcaaagaagttaaaaag
cttataaacgagagctccagagcagttcaagaaaagaaaatcccaactgaaaagttaccg
tccttatttatttcgtatgcccgagaagatgacgagccatttgtggaaaaactctaccag
ggtctgaaagagaaaggttttgagatctggtgggatagaaccgccatgaaaaatcgcggc
agaacttttttgcaggaaataagagatgcaattgaagattcagacctattgattgccgtt
ataggacctaaagcaattgaatctgattctgttcgatatgaatgggaacatgcccttctt
tttagtaaaggtgtgattccagttttgcgtatgggtgattataacttacttcttcctgaa
atgtcaaaattacactgcccggattttcgagaaaagcgtccttacgaggaggcactcgaa
gaacttatccggcttttaaaagagcctattccttctcttggcccaataattggaattccc
tcgcttcctcctaaccacttacctagaaaaaacgatctcaatataattaaagaaataata
ttagctgacacagttaaacctgtggtaatcacatctacgaaacaagttactgcacttcaa
ggtatgggaggaatgggaaaatccgtattatcagcagcttttgcccgctctgcggaaact
cgtagagctttttatgatggaatattctggattactgttggattagaagcatcggaatct
gatgctagtgggaatatgagactgatcggaacaaatcttggagatgaccctgtaaattat
agtagtaaaaaagaagctgaagcgagtctttcaaagatgctatcagataaagtctgcctc
attatacttgatgatgtctggaaagttccacaagctacgcctttcttcaatgctttaggt
tcacgttgcaggctacttattaccacgcgaaatgatgacgttgtcacttctcttggagct
cagaaacatgaaataaaagtgctcggcaaacctgaagcattgaagcttctagcaaattgg
tgcgaacaggaaatagattcattgacatctaaggctgccgaggttgccagagagtgcgga
tacttaccacttgccctatccatatgcggtgcaatggctaaaagtggcatatcatggacg
tatatcctcgaagccttacaagaggctgatcttgaattcattgaagctcaattgccaaat
tatccagatcccaatgtaggcagagcattgaaagtcagtgtagattttctatcacttgaa
gatcctaatgctgtaatgcgttatcaggaattagtgatctttcctgaagatgaattagtg
cccgaaactacaattgcaatgctttgggaacatactgggaacctgaaaagacgcaatgtt
gaaaaactgctcactaaattgaaagatagatctcttctgcgacttgatggtgaagcccct
aatcgccttatatctctgcatgacctgcaattagattacttgagagcgacagtgggggat
ttaaccagtctccataacaagctgctggcagcatatggtaaagaatgtggcaataaatgg
agtaatggttctgaagatggctatttcttcgaacatcttgcataccacatgaaagaagct
ggaagaagggaagaacttcacaagctccttttagactttgagtggatgtgcaaaaagatc
aaatgtgttcgtttaatgcaggaaaaagatggaaaaggaatcccagatttaaattcccta
cttcatgattacgaatttctctctaatgaaccaaaaattgaacttgtgaaagaggcaatc
cagctttcttttgacattatagctaaagatgaagctcaattttctgggcaacttattgga
cgactgcaagttttcaatcaaaatgaagaaataagattattattggatcaagctactcaa
tggaaagaagaagatgtcagactaattcctcttcaaccttgcctaaaaccgcccggtggc
tcgctgaaaagaacttttaaggcacatgctcatccaataaatgatgtcgttatcacatcc
aatggaaaagttgcaatttcggcttcaacggacaaaaccattcgaatttgggatttgaat
gagtggatagaaaaggggacgttgaagggacatctcactcctgtaactgcaattgcggta
tcattggacggaaaatacgccgcttcttgttcttaccacataatgtgcttaattggagat
aacaacattaaggtttgggacttggaaaaaagagaagaaaaaacaactcttaaaggacac
acacattgggtccaaacagttgctattactccagacggaaaatatatcgtttctggatca
cttgataaaactattaaatttgggatttag

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