Methanosarcina barkeri Wiesmoor: MSBRW_0638
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Entry
MSBRW_0638 CDS
T03839
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mbw
Methanosarcina barkeri Wiesmoor
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbw03400
]
MSBRW_0638
DNA repair and recombination proteins [BR:
mbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSBRW_0638
Archaeal homologous recombinant proteins
MSBRW_0638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
SMC_N
AAA_21
AAA_29
SbcC_Walker_B
AAA_16
ABC_tran
DUF7351
Motif
Other DBs
NCBI-ProteinID:
AKB49891
UniProt:
A0A0E3LKP7
LinkDB
All DBs
Position
complement(767849..771073)
Genome browser
AA seq
1074 aa
AA seq
DB search
MKLKNLHIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKILSKDFVLA
DVIFKGAENAKINLGFEHLGQDYLIEQAFRYSSKSENASNSKCVLYANGESIVDQATRTY
EEVCSLLNMDEEAYRNCAYIRQGEIDVLINAKPKDRQRMIDGLLQLGKLEEYRERAGSAK
TAVRRLQRDTSNSLSGVKAEIEGIESTEPHAVLNGLRQKIKESDTILKKCNENKEAAAAQ
KEKLDLMITEHRERLQEIQTLKQALSKSQEDKAGCIREKEAFAREAHEQRQALLGLEEEN
NHIRGECGFGDLEIEALSLQKEKEEFLAREKVNVISKELALLLREEEVHTQDLRDFENEK
AETEQSLMQCRADIGATNGEIEGNRKNILRIEDENKKLKEAAKETTGFTDTYEIPLFINE
LEEKESLLRERKNEASTKLALAFKEKETGDINLLTLDKELQNTKVAVRKSKTEIEILEEE
LRENEKAVLEVKEQKSEASAGLKGLGFTGEQLEDLEYLSELLLENKNRLHGREKELEATL
RELDKVIRKNRQLLAEGKCPTCGQDLKGSEIACTTGESEQKREKLAAELLDIKLQQAEVE
KKLNRLKDAKKLEKRISDYDLETERLKNKAKDLQERITIHKTRTEEDSLKLEGLNKQKEE
LEAKMGKLLPDIKALQGWEAAAQKAHGESERVLQEAKAFEKKLAENTSEIESLNGKIRTS
LALIENYGQRLGELNEKLKGLAERETQEKEKLKTLEVELEALRKKEALAKETHDESSKHL
LKTKKLGANLIQMDNIKHKISELEASIRNLAEKVGFFDREILERNERVKQLEGKLQGSRF
EDLQSKRTQLEEYQANLTEKTRQTTAAKDALLKEVGMVENSLKRRNELKDELKALENRKQ
YLEAVYSNAEELESMYMRVRADMRNRNIGALSTLLNEMFSFMYTNNAYSHIELDPEYNLT
VYRKDGTPLEPKLLSGGERAIFNLVLRCAIYRLLALGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDMMRGIGVGQIIVVSHDESLIDSADHVFQVEKDPITNMSSIVKL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcaaaaacctgcatattgaaaacatccggagctataaaaaactggattttaca
tttgaagacggagttacagtcatttccggggtgaacgggagcgggaaatcaagcctgctt
gaagcatgttttatgggacttttcgggagcaaaattctttcaaaggactttgtgcttgca
gatgtaatcttcaagggggccgaaaacgcaaaaataaacctgggttttgagcatttaggg
caggattaccttatagaacaggctttcaggtattcttctaaaagtgaaaacgcttcgaat
tcgaaatgcgtgctctatgccaatggggaaagtattgttgatcaggctacacggacttac
gaagaggtctgctctcttctgaacatggacgaagaggcgtacagaaactgtgcttacatc
aggcagggcgaaattgacgtactcattaatgcaaaaccaaaagacaggcagcggatgatc
gacggcttgctgcagcttggaaagctcgaagaatacagggaaagagcaggaagcgcaaaa
acggctgtaagaaggcttcaaagggacaccagtaacagcctttcgggtgtaaaagccgaa
attgaggggatcgaaagtacagaaccgcatgccgttttgaatgggctcaggcagaagata
aaggaaagcgatactatcttaaaaaaatgtaatgaaaataaagaggctgcagctgcccag
aaagaaaaactcgaccttatgattacagaacacagggaacgtctccaggaaatccagact
ctgaaacaggccctgtctaaatctcaggaagacaaggcaggctgtatccgggaaaaagaa
gcctttgccagagaagcccatgaacaaaggcaggctctgcttggactagaggaagagaat
aatcatattcggggagaatgcggctttggagaccttgagattgaggctttgagcttgcag
aaggaaaaagaggagtttcttgccagggaaaaggtaaatgtaatctcaaaagaacttgct
cttcttctcagggaagaagaagttcacactcaggatctgcgcgactttgaaaacgaaaag
gctgagaccgaacagagtttgatgcagtgcagggcggatatcggggctacaaacggggaa
attgaaggaaacagaaaaaatatactgagaattgaggatgagaataaaaagctaaaagaa
gctgcaaaagagaccacaggcttcacggacacttatgaaattcctttgtttataaatgag
ctggaagaaaaagaaagccttcttcgtgaacggaaaaacgaagcctcaacaaaacttgca
cttgctttcaaagaaaaagaaaccggagacataaatctcctcacacttgataaggaactt
caaaataccaaagtcgcagttcgaaaaagtaaaaccgaaattgaaattcttgaagaggag
ctcagggaaaatgaaaaggcagttctggaagttaaggagcaaaaatccgaagcttctgca
gggttaaaaggacttggctttaccggagagcagctcgaggacctggaatacctcagcgaa
cttctgctggaaaacaaaaacaggctgcatgggcgagaaaaagagcttgaagctaccctc
agggagcttgataaagttatccgtaaaaaccggcagctacttgccgaaggaaaatgccct
acatgcgggcaggatcttaaaggctctgaaattgcatgcacaaccggggaatccgaacag
aagagagaaaaacttgcagcagaacttctcgatataaagctccagcaagccgaagtcgag
aaaaaacttaatcgactcaaggacgcaaaaaaactggagaagcggatttcggattacgac
ctggaaaccgaaagactcaaaaataaggcaaaagacctgcaagaaaggataacgatccac
aaaacccgaaccgaggaagattcccttaaacttgaaggccttaataaacaaaaggaagaa
cttgaggctaagatgggcaagcttcttcctgatattaaagccctgcagggatgggaagcg
gcagctcaaaaagctcatggtgagagtgaaagagtacttcaagaggcaaaagcctttgag
aaaaagcttgccgaaaacacctcggaaatagaaagcctgaacgggaaaatcaggacttcc
ctggcactgatcgaaaattacgggcagaggcttggagagctcaatgagaaactaaaaggg
cttgccgaacgagagactcaggaaaaggaaaaactcaaaaccctggaagttgagcttgaa
gccctgaggaaaaaagaagccctggcaaaagaaacccatgacgagagttcaaagcatctc
ttgaagacaaaaaaactcggggcaaacctgatccagatggataatataaagcacaaaatc
tccgagcttgaggcttcaatcaggaaccttgccgaaaaagtcggcttttttgaccgggaa
atccttgaaagaaacgagcgggtaaaacagcttgaaggaaaacttcagggaagcagattc
gaagatcttcagtcaaagcgtacccagcttgaagagtatcaggcaaaccttactgaaaaa
acccggcaaaccacggccgccaaagatgctctcttaaaagaagttggtatggttgagaat
agtttaaaacgccgcaatgagctgaaggatgaactcaaagcccttgagaacaggaagcag
taccttgaagccgtatatagcaatgccgaggagcttgagagcatgtatatgcgcgttcgg
gcggatatgcggaatagaaacataggggctctttctacccttttgaatgaaatgttcagc
ttcatgtacacaaataatgcgtattcccatatcgaactcgacccggaatataaccttacg
gtttacagaaaagacggcactccacttgaaccaaaactccttagcggaggagaacgtgca
atctttaaccttgtcctgcgctgtgcgatctacagacttcttgctctgggttttggcgga
gatagggcagacgggcttccccctatgatccttgacgagcctacagttttcctggaccgc
gggcatataaaccagcttttgaaactcatagacatgatgcgtggcataggcgtaggccag
attattgtggtctcccatgacgagtcccttatagattcggcagaccatgtcttccaggta
gaaaaagaccctattaccaatatgtcgtctattgtaaaactttaa
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