Methanosarcina barkeri Wiesmoor: MSBRW_0800
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Entry
MSBRW_0800 CDS
T03839
Name
(GenBank) Archaeal transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSBRW_0800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbw03021
]
MSBRW_0800
Transcription machinery [BR:
mbw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
MSBRW_0800
Prokaryotic type
Archaeal type
TFE
MSBRW_0800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HVO_2753_ZBP
RepL
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AKB50053
UniProt:
A0A0E3QJ84
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All DBs
Position
961288..961782
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AA seq
164 aa
AA seq
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MVDLNDKVIRGYLLSLVGEDGLQMIEKMPEGEVTDEEIAAKTEVLLNTVRRTLFILNENK
FAICRRERDSNSGWLTYLWRLDFSDIEHQLMKEKKKLLRNLKTRLEFEENNVFYMCPQGC
VRLLFDEATETEFLCPMCGEDLVFYDNSHFIDVLRKRVDALSSA
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgatttaaatgacaaggtaattagaggatacctcctgagccttgtaggggaagac
gggctacaaatgattgaaaaaatgcctgaaggcgaggttacggatgaagaaattgcggca
aagaccgaggttctgttgaacaccgtgaggagaactctcttcatattaaacgaaaacaaa
tttgcgatatgtcgtagggagagagattcaaacagtgggtggttaacatacctctggcgc
ctggatttttctgacatagagcaccagcttatgaaggaaaagaaaaaattgctccgcaac
ctgaagacccgccttgagttcgaagaaaataatgttttctatatgtgccctcagggttgt
gttcgccttctttttgacgaagctacagaaaccgagtttctttgtcccatgtgtggagaa
gacctggtcttctacgacaactcccattttattgatgtcctgagaaagcgtgtagatgct
ctcagttcagcgtaa
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