KEGG   Methanosarcina barkeri Wiesmoor: MSBRW_0800
Entry
MSBRW_0800        CDS       T03839                                 
Name
(GenBank) Archaeal transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
mbw  Methanosarcina barkeri Wiesmoor
Pathway
mbw03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mbw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MSBRW_0800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mbw03021]
    MSBRW_0800
Transcription machinery [BR:mbw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     MSBRW_0800
 Prokaryotic type
  Archaeal type
    TFE
     MSBRW_0800
SSDB
Motif
Pfam: TFIIE_alpha HVO_2753_ZBP RepL Zn_Ribbon_TF
Other DBs
NCBI-ProteinID: AKB50053
UniProt: A0A0E3QJ84
LinkDB
Position
961288..961782
AA seq 164 aa
MVDLNDKVIRGYLLSLVGEDGLQMIEKMPEGEVTDEEIAAKTEVLLNTVRRTLFILNENK
FAICRRERDSNSGWLTYLWRLDFSDIEHQLMKEKKKLLRNLKTRLEFEENNVFYMCPQGC
VRLLFDEATETEFLCPMCGEDLVFYDNSHFIDVLRKRVDALSSA
NT seq 495 nt   +upstreamnt  +downstreamnt
ttggtcgatttaaatgacaaggtaattagaggatacctcctgagccttgtaggggaagac
gggctacaaatgattgaaaaaatgcctgaaggcgaggttacggatgaagaaattgcggca
aagaccgaggttctgttgaacaccgtgaggagaactctcttcatattaaacgaaaacaaa
tttgcgatatgtcgtagggagagagattcaaacagtgggtggttaacatacctctggcgc
ctggatttttctgacatagagcaccagcttatgaaggaaaagaaaaaattgctccgcaac
ctgaagacccgccttgagttcgaagaaaataatgttttctatatgtgccctcagggttgt
gttcgccttctttttgacgaagctacagaaaccgagtttctttgtcccatgtgtggagaa
gacctggtcttctacgacaactcccattttattgatgtcctgagaaagcgtgtagatgct
ctcagttcagcgtaa

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