Methanosarcina barkeri Wiesmoor: MSBRW_0921
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Entry
MSBRW_0921 CDS
T03839
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRW_0921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbw03021
]
MSBRW_0921
Enzymes [BR:
mbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRW_0921
Transcription machinery [BR:
mbw03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRW_0921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_9
Fer4
Fer4_7
Fer4_10
Fer4_6
Fer4_21
Fer4_16
Fer4_8
DUF4879
Motif
Other DBs
NCBI-ProteinID:
AKB50174
UniProt:
A0A0E3QK25
LinkDB
All DBs
Position
1097563..1098363
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AA seq
266 aa
AA seq
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MTMEVDILELSDRSAKFVLSKVSTSFANGIRRAMIADVPTLAIEYVNLYENTSVLYDEQL
ALRLSLIPLVTDVETYVPQAECDVCGGEGCPACEVSLTLSAEGPCTVYSRDLISSDPKIQ
PADPNIPIVELKKGQKLVLEALAHMGYGRDSVKWQAGVACGYKNVPVITIENCDACGHCA
AECPKGIIRFEESGAKVSSEDVLKCSLCKLCEQVCDIHAIKIGFDENAFVFTMESDGSYT
AKDLALNASNVIKGKAEELLSILDQF
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggaagtagacattctggagttatcggatagatctgcaaaattcgtgctttca
aaagtaagcacatcttttgccaacggcattcggcgcgccatgatcgcagatgtaccaaca
cttgcgattgaatatgtgaacctttacgaaaatacctcggtactctatgatgagcagctg
gctctacgtctgtccttaatcccgcttgttacggatgtagagacatatgtgccacaggca
gaatgcgacgtctgcggaggagaaggttgtcctgcctgcgaggtttccttaaccctgagt
gcagaaggtccgtgcacggtttattctcgggatcttatttcctctgacccgaagatacag
ccggctgatcccaatattcctattgttgagctgaaaaaagggcagaagcttgtgcttgag
gcccttgctcatatgggctatggcagggacagtgttaaatggcaggcaggagtcgcttgc
ggctacaagaatgtgcctgttataaccattgaaaactgcgatgcatgtgggcactgtgca
gccgaatgtccaaaaggcattatacggtttgaagagtcaggggccaaagtttctagcgaa
gatgtcctgaaatgttcactctgtaaactctgtgaacaggtctgtgatattcacgcgata
aaaattggcttcgatgagaatgcctttgtgtttacaatggagtccgatggttcttacaca
gccaaagaccttgcccttaatgcgtcaaatgtgatcaaaggcaaagctgaagaactcttg
agcattctggaccaattctga
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