Methanosarcina barkeri Wiesmoor: MSBRW_1043
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Entry
MSBRW_1043 CDS
T03839
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRW_1043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbw03021
]
MSBRW_1043
Enzymes [BR:
mbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRW_1043
Transcription machinery [BR:
mbw03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRW_1043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
CBP66
Motif
Other DBs
NCBI-ProteinID:
AKB50296
UniProt:
A0A0E3LKX8
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All DBs
Position
1276075..1277355
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AA seq
426 aa
AA seq
DB search
MSISESTIDSMIKDLPLPSNILNTLREDVIKAGVSKKEMEEIIEQVMEEYRSSCIEPCDA
AGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKE
NPEDYAYDREKTRALAWEIEATKIDHIADVTTDLSQMKLIIDLHEKAMEGRNITIDQVKE
KFNEELNVMVTISPDIDNQIIIAPGEPSYRELLQLAKSIHNVTLKGIEGIKRVVVRKEGE
EYTLYTEGSALREVLQFDGVDKTRTSTNNINEIYEVLGIEAARNAIIKEATDTLREQGLT
VDIRHIMLVSDLMTCDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQ
GVTENIIVGQPIRMGTGDVHLITRRREEIEEAVEAAAAEAAAAEAAEAAEAAEAAEAAEA
AEAAEE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagtgaaagtacaatcgatagtatgataaaggacctgcctctcccttcgaat
atccttaatactctaagagaggatgtcatcaaagccggagtaagtaagaaggaaatggaa
gagattatagaacaggtaatggaagaatatcgtagctcgtgcattgagccctgtgatgct
gccggtgtggttgcagcccagtccataggggagccgggtactcagatgacaatgcgtact
ttccactatgctggtgtggccgagattaacgttactctcggtcttccccgtcttatcgaa
attgtggatgctcgaaaaattccgagtactcctatgatgacaattgctctttctaaagag
aatcctgaagattatgcttacgacagggaaaagacaagagcccttgcctgggaaattgaa
gcaacgaaaatcgatcacattgctgacgtgaccactgatctttcccagatgaaattgata
attgacctgcacgagaaggcgatggaaggcaggaacattactatagatcaggtaaaagaa
aagttcaacgaagaattgaatgtaatggttaccatttccccggatatagataaccagatt
attattgccccgggagaaccttcttacagggagcttcttcagcttgcaaaaagtatccat
aatgtcactctgaaagggatagaagggatcaagcgtgtggtagttcgtaaggaaggggaa
gaatacacactatatactgaaggttcggccctgcgtgaagtgcttcagttcgatggtgtg
gacaagacaagaacaagtacaaataatattaatgaaatttatgaagtgcttgggatcgaa
gctgcaaggaatgcaattatcaaggaagcaacagacaccctgcgcgaacagggtcttact
gtggacatccggcatattatgctcgtttccgatctcatgacctgtgatggagaagtaaaa
cagatcggaagacacggaatttcaggtgaaaaggcaagtgtctttgcccgtgcggctttc
gaagttacggtaaatcatctgctggatgcagggatgcgcggtgatgtggatcagctccag
ggggtcacggaaaatattattgttggccagcctatccgtatgggaactggagacgtgcac
cttataaccagaagaagagaggaaattgaagaagcagtagaagcggcagcggcagaagcg
gcagcggcagaagcagcagaagcggcagaagcagcagaagcggcagaagcagcagaagca
gcagaagcagcagaagagtga
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