Methanosarcina barkeri Wiesmoor: MSBRW_1227
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Entry
MSBRW_1227 CDS
T03839
Name
(GenBank) Putative ski2-type helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbw03400
]
MSBRW_1227
Enzymes [BR:
mbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSBRW_1227
DNA repair and recombination proteins [BR:
mbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSBRW_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
HHH_5
ResIII
Helicase_C
DEXQc_Suv3
HTH_61
DNA_pol_lambd_f
IMS_HHH_1
HHH_2
Cdd1
DUF4189
Motif
Other DBs
NCBI-ProteinID:
AKB50480
UniProt:
A0A0E3QKX9
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All DBs
Position
1526904..1529093
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AA seq
729 aa
AA seq
DB search
MKIESLDLPDEVKQFYLNSGIMELYPPQAEAVEKGLLEGRNLLAAIPTASGKTLLAELAM
LKSILAGGKALYIVPLRALASEKFRRFREFSELGIRVGISTGDYDLRDEGLGVNDIIVAT
SEKTDSLLRNETVWMQEISVVVADEVHLIDSPDRGPTLEVTLAKLRKMNPSCQILALSAT
VGNADELAVWLEAELVVSEWRPTELLEGVFFNGTFYCKDREKTVEQSTKDEAVNLALDTL
KKDGQCLVFESSRKNCMAFAKKAASTVKKTLSAEDRNALAGIADEILENSETDTSTNLAV
CIRSGTAFHHAGLTTPLRELVEDGFRAGRIKLISSTPTLAAGLNLPARRVIIRNYRRYSS
EDGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLVAKSYKEFVFLFENYIEANAEDIWSKLG
TENALRTHVLSTISNGFARTYDELMDFLEATFFAFQYSNFGLSTVVNECLNFLRQEGMLE
KDDALIPTSFGKLVSRLYIDPLSAARIAKGLKGAKSLSELTLLHLVCSTPDMRLLYMRSH
DYQDINDYVMAHASEFVKVPSPFDTTEYEWFLGEVKTSLLLLDWIHEKSENEICLKFGTG
EGDIHSIADIAEWIMHVTSQLAGLLDLKGAREAAELEKRIHYGAAPELIDLLNIRGIGRV
RARKLYEAGFKSSAELAEVDPEKVAALLGPKIADRIFKQIRGRGTSSGIIASEPPEKSPY
SGQKTISDY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaaagtctcgatctgcccgatgaagtaaagcagttttatctcaattccgga
attatggaactttatcctcctcaggccgaagccgtggaaaaaggtctgcttgaaggaaga
aacctgcttgctgcaatccctacagcttcagggaagactctccttgccgagcttgcaatg
ttgaaatccatccttgcaggaggaaaggcgctctatatcgtgcctctcagagctcttgct
tccgagaaattcaggcggtttagggagttttcggaacttggaataagggttgggatctct
acaggggactatgacctgcgggacgagggactcggagtaaacgacattattgttgcaacc
tccgagaaaaccgattcccttctcagaaacgagaccgtctggatgcaggaaatttcagtt
gttgtggcagacgaggttcatctcatagactcaccggataggggccctacgcttgaggtt
acccttgcaaagcttcggaaaatgaatccttcctgtcagatccttgcattatctgcaact
gtcgggaatgccgacgaactagcagtctggctggaagccgagcttgtagtaagtgaatgg
aggcctactgagcttcttgaaggggtattctttaatgggactttctattgcaaagatagg
gaaaaaactgttgagcagtccacaaaagacgaagccgtgaaccttgcgctggataccctc
aaaaaagatgggcagtgtctggtttttgaaagcagcagaaaaaactgcatggcttttgca
aaaaaggcagcttcaactgttaaaaagactctgtcagcagaagataggaatgcacttgca
ggaattgcagacgagatccttgaaaacagtgaaaccgatacttcaacgaaccttgcagtc
tgtattcgttcaggaacagcttttcatcatgcaggcctcaccacgcctttaagagaactt
gtggaggacggtttcagggctgggaggataaagttgatttccagcactcctactctcgca
gccgggcttaacctgcctgcgcggcgtgtgattatccgaaattatcggcgctattcttct
gaagacggaatgcagcctattcctgtactcgagtacaaacagatggcaggcagggcaggc
aggccgaggcttgacccgtacggagaagccgtgcttgttgcaaaatcatataaggagttt
gttttcctttttgaaaactatatcgaagccaacgccgaagatatctggtccaagctcgga
accgaaaatgctctcaggacccatgtgctctctacgatctctaacggttttgcgcggaca
tatgatgaactcatggattttctggaggcaacattttttgctttccagtactcgaacttc
gggctttctacggttgtgaacgaatgccttaactttttgcgtcaggaagggatgcttgag
aaagacgatgccctcatccctacaagcttcggcaaacttgtctcaaggctctatatcgac
cccctgtcagctgccaggattgcaaagggcctgaaaggggcaaagagcctgagtgagctt
accctgctgcatctggtgtgcagcacacctgacatgcgcctgctttacatgcggagccat
gattatcaggatatcaacgattatgtaatggctcatgcgagtgaatttgtaaaggtgccc
agtcccttcgatactacggaatatgaatggttccttggggaagtcaagacttccctcctt
ctgcttgactggatccatgaaaaatctgaaaacgagatttgcttaaagttcggcactggg
gaaggtgacattcattcaattgcggatattgcggaatggataatgcacgtcacctctcaa
cttgccgggctccttgacctcaaaggtgcaagagaagccgcagaacttgaaaagaggata
cattacggagcagcccctgaacttatagatctgctcaatatcagaggtatagggcgcgtg
agagcaaggaaactctatgaggcaggcttcaaatcctctgcagagcttgcagaagttgat
cctgaaaaagttgctgctcttcttgggccgaaaattgcagaccggatttttaagcagatc
aggggtagagggacatcttctggaattattgcttctgaacctcctgagaaaagtccgtat
tctgggcaaaaaacaattagtgattattga
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