Methanosarcina barkeri Wiesmoor: MSBRW_1529
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Entry
MSBRW_1529 CDS
T03839
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mbw03016
]
MSBRW_1529
Enzymes [BR:
mbw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MSBRW_1529
Transfer RNA biogenesis [BR:
mbw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSBRW_1529
Prokaryotic type
MSBRW_1529
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AKB50782
UniProt:
A0A0E3QKS3
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All DBs
Position
complement(1904307..1905623)
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AA seq
438 aa
AA seq
DB search
MQVPEIEKQIGITLYSTDTDGLGGQLRQEVEDFIVKEITNREEGQEGKYLILELIKRDWD
THHLTRTLAKILQVSQKRISVAGTKDKRALTTQKISIFDIDAQKIEKIHLKDVELKVLGR
SRKSVELGDLWGNNFRITIRNITHSSEEIHKLLEKTTNEILAQNGVPNFFGIQRFGSVRP
VTHLVGKAIVEGDFEKAALLYIAEPFPDEPEDTRKARQFVKETLDFKEGLKIYPLHLGHE
RAMMNHLIANPDDFAGAFLVLPKNLYRMFVHGYQSYIYNIILCRRIEKGLSLNEAVEGDV
VCFKNEHGLPDSSKTEKATTETVNAMNRLIKKKRAFITAPLPGHNTEFASGIPGEVEQAV
LDELKVPLQGFNIEETPEMSSKGTRRELLLQVEPKFEVAEDELNPGKLKAVLEFMLPKGS
YATTVLREYMKVDPLQMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgccggaaattgaaaaacagatcggaataactctttactccacggatactgac
ggcctcggagggcagcttcggcaggaagtggaggattttattgttaaagaaattacaaac
cgggaggaaggacaggaagggaaataccttattcttgaactcataaagcgagactgggac
acacatcacctgacccggactcttgcaaaaatcctccaggtaagccagaagcgaatcagc
gttgcaggcacaaaggacaagcgtgcacttaccactcagaaaatcagtatttttgacatt
gacgcccagaaaattgagaagatccatttaaaagatgtagagctgaaagtccttggtcgc
tcccgaaaatccgttgaactcggagacctgtggggaaacaatttcagaattactatccgg
aatataacccactcgagtgaggagatacacaaactgctcgaaaagaccacaaacgagatc
ctggctcagaacggagttccgaacttcttcgggatccagcgctttggctcggtacgtcct
gtcacgcatcttgtaggaaaagccattgttgagggagattttgaaaaggctgccctgcta
tatattgccgaacccttccctgatgagccagaagatacacggaaagcccgccagtttgtt
aaagagaccctcgatttcaaagaaggcctgaaaatctatcctctccacctcgggcatgaa
agagcaatgatgaatcatctgatcgcaaacccggatgactttgcaggagcttttctcgtt
ctcccgaaaaacctttacaggatgtttgtgcacggctaccagtcctacatatataacata
atcctgtgcaggaggatcgaaaaaggcctttccttaaacgaggccgtagaaggtgatgtt
gtctgtttcaagaatgaacatggcctgccggattcttcaaaaaccgaaaaagccaccaca
gaaaccgtaaatgccatgaaccgcctgattaagaaaaaacgggccttcataaccgctccc
cttccgggccataatacagaatttgcgtcaggcattcctggagaggtcgaacaggcagtt
ctcgatgaactcaaagtccctctgcaaggcttcaatatagaagaaactcctgagatgagt
tcgaaaggcaccaggcgggaactcctccttcaggttgaaccgaagtttgaggttgctgaa
gacgaactgaacccgggaaagttaaaagctgtgcttgagttcatgctgccaaagggaagt
tacgcaacaaccgtgctgcgggagtacatgaaggtagatcctctgcaaatgagttga
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