Methanosarcina barkeri Wiesmoor: MSBRW_2037
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Entry
MSBRW_2037 CDS
T03839
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSBRW_2037
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mbw02000
]
MSBRW_2037
Transporters [BR:
mbw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MSBRW_2037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
DEAD
AAA
MMR_HSR1
AAA_23
AAA_30
AAA_24
AAA_16
nSTAND3
RsgA_GTPase
AAA_15
AAA_21
AAA_14
Rad17
SRP54
DUF898
AAA_29
TsaE
AAA_28
AAA_19
Zeta_toxin
DO-GTPase2
AAA_18
Phage_holin_4_1
Motif
Other DBs
NCBI-ProteinID:
AKB51290
UniProt:
A0A0E3QM12
LinkDB
All DBs
Position
complement(2617876..2619723)
Genome browser
AA seq
615 aa
AA seq
DB search
MPQNNVMPHNMPHNITGRPAGGPSAFLQREKTEIKDVKGTFIRIIMYLGKWWRTLLIIFF
CALVTTVITIIGIQLNGYAVDEFISKKDIAGLARICIIMILIYLVAVFSTYMQNSLMIRV
AQKTSASIRNDLFSSLQKLPLKYFDTHSSGDLMSRLTNDVDNINLTLSQSVVQLFSGVIS
VVGMLIAMLLLSPLLTLIGLLTTPLMFFTSKVLAVKSQKFFKEQQYELGRLNGYIEEMVS
GQKVIKVFSREKEVEGHFKEINEKLVSSSMKAQAISSVMGPVNNTINNLTYLIITVCGGV
LIIKGFAGITVGVIFSFLLYMRNFTQPINNILNLFSTIQSALAGAERVFEVMDEEKEKDA
DNARDIQNIEGNVKIESVNFSYIPGKPVLKEATISAKKGQTIAIVGPTGAGKTTIINLLT
KFYGIDDGAIYIDGKNINAITRKSLRQSISMVLQDTFLFSDTIRENIRYGRLTATDEEVE
QAAKLAHAHDFIMQLPQGYDTILSDNGGNLSQGQRQLLSIARAMIAQSSVLILDEATSSI
DTRTELIIQSALLKLMHGKTSFVIAHRLSTIKNADKIIVLDGGRVVETGTHSELLVSGGF
YANLYKSQFKKGMAI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaataacgtgatgcctcataatatgcctcataatattacaggccgcccggca
ggaggaccaagcgcttttcttcaaagggaaaaaacggaaatcaaggacgttaagggaaca
ttcatacgcattattatgtaccttggcaaatggtggcgcacattgctcatcatttttttc
tgtgctcttgttacaacagtgatcaccattatcggcattcaactaaacgggtacgcagtc
gacgagttcatctctaaaaaggatattgccggacttgctcgcatctgtattatcatgatt
cttatttaccttgttgcggttttttctacttacatgcagaattccctgatgatccgtgtt
gctcagaaaacttcggctagtatccggaacgatcttttcagcagcctgcaaaagctgccc
ctcaagtattttgatacccactcaagcggggacctcatgagccgcctgacaaacgatgtt
gacaacatcaaccttacactttcacagagtgtcgtgcagcttttttccggcgtcatcagc
gtggtcggtatgttgatagcgatgctgctgctcagcccgctgcttacgctgatcgggctg
ctgacaacgcctctgatgttctttacgtcaaaagtccttgcagtaaagtctcagaagttt
tttaaggaacagcaatatgagcttggacggcttaacggatatatcgaggaaatggtctcc
ggccaaaaagttattaaggtcttttcccgagaaaaggaggtggagggtcacttcaaagaa
atcaatgaaaagcttgtttccagttctatgaaagcacaggcaataagcagcgtcatggga
cctgtgaataacactatcaataatctgacctatttgattatcacggtctgcggtggcgtt
ttaatcataaagggatttgcgggaatcactgttggcgtaatattttctttcctgctctat
atgcgcaattttacccagccaatcaacaatattctcaaccttttcagcactatccagtca
gcccttgcaggcgcagagcgagtgtttgaggtaatggacgaggaaaaagaaaaagatgcc
gataatgccagagacattcaaaacattgaaggcaacgtgaaaattgaatctgttaatttt
tcatacatacctggtaagcctgtacttaaagaggcaacaatttctgcgaaaaaaggtcag
acaattgccatcgtgggccctacgggtgctgggaaaacaaccattatcaatctgctcacc
aagttttatggcattgatgacggagcaatctatattgatggaaagaatataaatgccatt
actcgaaagagtctgcggcagtccatttcaatggtactccaggatacttttcttttctcg
gacaccatacgcgagaatatccgctatggcaggctgacagcaacggatgaagaagttgaa
caggcagcaaagctggcacatgcccatgactttattatgcaactgccacagggttatgat
acaattctttctgacaatggcggcaacctttcacagggacagcggcaattgcttagtatt
gcgagagcgatgatcgcacaatcttctgtgttgatacttgatgaagcgacttcttcaatc
gatacacggacagagctgattattcagagtgctctgctcaaactaatgcacggaaaaacg
agttttgttatcgcacaccgcctttccaccatcaaaaacgcagataaaatcatcgtttta
gacggcggtcgagtagtagaaacaggtacgcatagcgaactgcttgtttcgggcggtttc
tatgccaacctttacaaaagtcagttcaaaaaaggcatggcaatataa
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