Methanosarcina barkeri Wiesmoor: MSBRW_2038
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Entry
MSBRW_2038 CDS
T03839
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MSBRW_2038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mbw02000
]
MSBRW_2038
Transporters [BR:
mbw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MSBRW_2038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
ABC_ATPase
nSTAND1
DUF87
HisZ-like
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKB51291
UniProt:
A0A0E3LLH7
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All DBs
Position
complement(2619710..2621449)
Genome browser
AA seq
579 aa
AA seq
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MFQLIKKNLKGMALIYSLLAPLLMLIEVFMDLQQPRLMANIVDIGVQNRDSGYILSTGFK
MVLCAFAGLIGGAGCGVIASFASMMLAGSLREELFHKIQSLSYTEIDHFKTSSLITRLTN
DVTQIQNMFLMLLRGMVRSPLLCIGGIFMSFLLSPSLSIVFFIILPILITCVAFVMMRSV
PLYTQMQFWLDKVNTVMRENLLGVRVIKAFNLEDKQNTLFSNVNTKFTEKSIRAQNLTFT
LMPIATLVMNLSVVAILWFGGNMVVSENIETGKIMAFVNYLVQITNSLIMLVNMIINISR
AQASAGRIKEVLVCEASIKECNSPVLPKNYDIEFKNVSFRYGESGEYVLKDLSFLFKEGQ
TVGIIGATGSGKSSVVSLIPRLYEATCGQVLIGGCDVKDMPVQHLRSSIGVVLQENILFH
GTVKENMNFGNEEADEAKIWDGLQAAQAEDFIQALPYKLQSQVEQRGKNFSGGQKQRLSI
ARTLLKKPKILIFDDSTSAVDLSTEARLQFEIAKKMKENTVIVIAQRISGVMDADTILML
DHGSVIAKGTHKELLQSNEVYRNIAVSQLGKEVLLNATE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacttattaaaaaaaatcttaagggcatggctctgatttattctttacttgct
cctcttttgatgttgatagaagtcttcatggaccttcaacaacccaggcttatggcaaat
attgtggatataggtgttcaaaacagagattcgggatatatattatcgacaggcttcaaa
atggtcctttgtgcgtttgccggattaattggcggcgcaggctgcggtgtgatcgcctcg
tttgcatctatgatgttagccgggagtttgagagaagagttatttcataaaatacagtcg
ctttcctatacggaaattgaccatttcaaaacatcgtcgcttattacaaggctgaccaac
gatgtaacgcaaattcagaatatgtttctcatgttgctgcgtggcatggtacgttcacca
ttgttgtgcatcggcggcatatttatgtcctttttgctgagtcccagtctttcaattgtt
ttctttatcattttgcctattctcatcacttgcgtcgcatttgtgatgatgagatcggtg
ccgctttatacgcagatgcagttctggcttgacaaggttaataccgtcatgcgtgaaaat
ctgctgggtgtacgtgttataaaagcctttaatttagaagacaaacagaatacgcttttc
agcaacgtgaatacaaaatttacagaaaaaagcatacgggcacagaacctgacctttaca
ctgatgccgatagctactctggttatgaatctgagcgtggttgccatcctatggtttgga
ggcaatatggtcgtttccgaaaatattgaaaccggtaagataatggcatttgtcaattac
cttgtgcagataacaaactctcttataatgcttgtcaacatgattataaacatttcacgc
gcacaggcatctgcaggacgtataaaagaggttttagtctgtgaagcgagtattaaggag
tgcaattctccagtattgccaaagaattatgacattgagttcaaaaatgtcagttttaga
tacggtgaaagcggagaatatgttctgaaagacttgtcgttcctatttaaggaagggcag
acagtaggcattatcggagctaccggctcaggaaagagctcagttgtaagcctgattcct
cggctgtatgaggcaacctgcgggcaggtcctgatcggaggttgtgatgttaaggatatg
ccagtacagcacctgcgcagtagtattggggtcgtgctgcaggaaaatattcttttccac
ggaacagttaaagaaaatatgaattttggtaatgaagaagcagacgaagcgaaaatatgg
gatggccttcaagctgctcaggcagaagattttattcaggccctcccttacaaattacaa
agtcaagttgaacaaagaggcaaaaacttttcaggtggacaaaaacagcgcctttccata
gcaagaactcttctgaaaaagccaaaaattttgatttttgatgactccacaagcgcagtt
gacctttctaccgaggcacgcctgcagtttgaaattgcaaaaaagatgaaagaaaacacg
gtaatcgtcattgcgcagcgtatatccggcgttatggacgcggacacaatattgatgctt
gaccatggcagcgttatcgcgaaaggcacccataaagaattactgcaaagcaacgaagta
tatcgcaatatagccgtttcacagcttggcaaggaggtgctcttgaatgccacagaataa
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