Methanosarcina barkeri Wiesmoor: MSBRW_2407
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Entry
MSBRW_2407 CDS
T03839
Name
(GenBank) DNA repair and recombination protein RadA
KO
K04483
DNA repair protein RadA
Organism
mbw
Methanosarcina barkeri Wiesmoor
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbw03400
]
MSBRW_2407
DNA repair and recombination proteins [BR:
mbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MSBRW_2407
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_5
ATPase
RecA
AAA_25
HHH
HHH_2
IMS_HHH_1
Cdd1
DNA_pol_lambd_f
AAA_22
IMS_HHH
AAA_24
HHH_8
NACHT
DnaB_C
ATP-synt_ab
DUF4332
SAM_BAF
ATPase_2
TsaE
TniB
PhoH
RecR_HhH
LytR_C
Motif
Other DBs
NCBI-ProteinID:
AKB51660
UniProt:
A0A0E3QP36
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Position
3101238..3102215
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AA seq
325 aa
AA seq
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MSQITLEELPGVGPATAEKLKEAGFNTIEAVAVASPSELATTAEIGESTAAKIINAARQA
ADIGGFETGDIVLERRKMVGKLTTGCMEFDEMMGGGIETQAITELYGEFGSGKTQLAHQF
AVNVQMDREHGGLNGSVIIIDTENTFRPERIAQMVKGLSEKYGMELDPEEFLQNIHVARA
YNSNHQILLVDSATDLANELREMGKPVRLLIVDSLMAHFRAEYVGRGTLADRQQKLNKHM
HGLLRFGDLFNASVVVTNQVMAKPDAFFGDPTRPVGGHVVGHTATFRLYLRKSKGDKRII
RLVDSPNLPEGEAVIAVTTAGLTDQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaataacactcgaagagttgcccggagttggccctgcaaccgcagaaaaactc
aaagaagctggatttaacaccattgaagctgtggccgttgcctctccttctgaacttgca
actacagccgaaataggggaatcaacggctgcaaaaatcattaatgctgcaaggcaagct
gctgatatcggaggttttgagaccggagacatcgtgcttgaaagacggaaaatggtaggc
aagctgacgaccggttgtatggaatttgatgaaatgatgggtgggggcatagaaacccag
gcaattaccgaactgtacggagaattcggttcaggaaaaacccagctggcccaccagttt
gcagtcaatgtccagatggacagggaacacggagggcttaacggttcggttattatcata
gacactgaaaacactttcagacctgaaaggattgcccagatggtaaaagggctttccgag
aaatacggcatggagcttgacccagaagagttcctccagaatatccatgtcgccagagca
tataattccaatcaccagatccttcttgttgactctgcaacagacctggcaaacgaactt
agggagatgggaaaacccgttcgtctgctgatcgttgactcgcttatggctcacttcagg
gctgaatatgtaggaaggggaaccctcgccgacaggcagcagaaactcaataagcacatg
cacggcctgctccgcttcggggatttattcaatgcctctgtggttgtaacaaatcaggta
atggcaaaacccgatgctttcttcggtgaccctacaaggcctgtaggaggccacgttgtg
ggacacacagcaactttcaggctttacttgcggaaatccaaaggagacaaaaggattata
cgtctggtggactctcccaatctgcccgaaggagaagctgttatcgcagtcactacagcc
ggactcacagaccagtaa
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