Methanosarcina barkeri Wiesmoor: MSBRW_2661
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Entry
MSBRW_2661 CDS
T03839
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBRW_2661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbw03019
]
MSBRW_2661
03009 Ribosome biogenesis [BR:
mbw03009
]
MSBRW_2661
04131 Membrane trafficking [BR:
mbw04131
]
MSBRW_2661
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbw04147
]
MSBRW_2661
Messenger RNA biogenesis [BR:
mbw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBRW_2661
Ribosome biogenesis [BR:
mbw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBRW_2661
Membrane trafficking [BR:
mbw04131
]
SNARE
SNARE associated proteins
Others
MSBRW_2661
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBRW_2661
Exosome [BR:
mbw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBRW_2661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_14
CDC48_2
TIP49
AAA_22
AAA_33
NACHT
IstB_IS21
Sigma54_activat
RNA_helicase
ABC_tran
nSTAND3
NPHP3_N
Parvo_NS1
AAA_28
Mg_chelatase
AAA_24
AAA_7
AAA_18
AAA_lid_PRS2_C
NB-ARC
ATPase
TsaE
Zeta_toxin
PhoH
SLFN-g3_helicase
AAA_17
AAA_3
AAA_11
Sigma54_activ_2
Vps4_C
ResIII
AAA_25
DUF815
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AKB51914
UniProt:
A0A0E3QLM9
LinkDB
All DBs
Position
complement(3435526..3437817)
Genome browser
AA seq
763 aa
AA seq
DB search
MTDSKTTIKLKVAEADQRDVGKGIVRIGESFREKLGLEPFDVIEIKGGKSTSALIGRPYP
SDSGLEIIRMDGFIRTNAKTSIGEYVAICKADWKEAKSVIFAPVARGMQIYAPSETLKAV
FMNRTVSKGDFISTTSLRKSRESETFGKGVMFEDFFQDFFGQGFEPSFGLGEIKLQVVST
SPSGIVKITDLTQVELLSEATEVIPEQNIPTVMYEDLGGLKEAIGKVREMIELPLNHPEL
FDRLGIDAPKGVLLHGPPGTGKTLLAKAVANESDAYFISINGPEIMSKYYGESERAIREI
FEDAEKNAPAIIFLDEIDSIAPKRAEVTGEVERRVVAQLLSLMDGLKARKNVIVIGSTNR
PEALDVALRRPGRFDREIELRVPDTDGRLEIFQIHTRGMPLAENVNLMDFAQITYGFVGA
DIAALCREAAMSALRRVLPKINLNEPEIPAEILDSLQVIREDFENALKDVQPSAIREILI
EVPTVGWDDVGGLEEVKRLLKEVVEWPLKNPESYRDIGVEAPKGVLLYGPPGTGKTLLAK
AIAHESDANFITAKGSDLLSKWYGESEKRIAEVFTRARQVAPSIIFLDELDSLAPIRGAS
ISEPQVTARILNQLLSEMDGLEELRAVVVIGATNRPDVIDPALIRPGRFDELILVPIPDE
GARREIFKVHTEKMELAEDIDIEKLVSITDQYTGADIAAVCKKAGRLALREDIHAKNVKQ
RHFLKAITETGPSVTPDTMKYYEAIKGELRTRKSKEIENPSYI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
ttgactgatagcaagacaacgataaaattgaaagttgcagaagccgatcaacgggatgtt
gggaaaggcattgtccggataggtgaaagtttccgggaaaaactgggtcttgagcctttc
gatgttatagaaatcaaaggggggaaatcgacttcagcccttatagggcgcccatacccg
agtgattcaggacttgagattatacgtatggatgggtttatccgtactaatgcaaaaacc
agtatcggggaatatgtagctatttgtaaagccgactggaaggaggcaaaaagcgtaata
tttgcgcctgtagccagaggtatgcagatctatgctccaagcgaaactcttaaagccgta
ttcatgaaccgtacggtttcaaaaggggattttatttccactacaagtttaaggaaatcg
agggaaagtgagacttttggcaaaggagttatgttcgaagatttcttccaggactttttc
ggccagggcttcgagccatctttcggacttggagaaataaaattgcaggtagtttctacc
tctccgtcggggatagtgaagattacagacttaacgcaggttgagcttttgtctgaagca
actgaagtaatccctgaacagaatattcctactgttatgtatgaagatctgggtgggcta
aaagaagccattgggaaagtcagggaaatgatagagttgcctttgaatcaccctgaactt
tttgacaggctagggatcgatgctccgaaaggggtactgctccacggtccgcccggaacg
ggaaagacgctgcttgcaaaagcagtcgccaacgaatccgacgcctactttatttctatc
aatggccctgagattatgtccaaatattacggcgaatccgaaagggcaataagggaaatt
ttcgaggacgcagaaaagaatgctcctgcaattatcttcctggatgagatcgattccatt
gcccctaaaagggctgaggtgaccggagaagtcgaaagaagagtagttgctcaacttctc
tcccttatggacgggcttaaggctcgcaagaatgtaatcgttatagggtcaaccaaccgt
cccgaagccctggatgtagcactccgccgcccaggcaggtttgaccgagaaattgaactt
agagtcccggatactgatggaaggctagaaattttccagatccataccaggggaatgcct
cttgccgaaaacgtaaacctcatggattttgctcaaataacatacggatttgtgggagct
gatattgctgccctatgcagggaggcagctatgagtgccctgcggagggttttacctaaa
atcaatcttaatgaacctgaaattccagctgaaattctggattccctccaggtaataaga
gaagattttgaaaatgctctcaaagatgtccagccttcagcaataagggaaatcctgatc
gaagtgccaactgtcggttgggacgacgtaggcggtctggaagaagtaaaaaggctcctg
aaggaggtagtagaatggcctctcaagaatccggaatcttatagagatattggggttgag
gctcctaaaggggtccttctgtatggccctccgggtacgggaaagactctgcttgcaaag
gcaatagctcatgaatcggatgctaattttattacagccaaggggagtgatttgctttcc
aaatggtacggggaatcagaaaaaaggatagctgaggtctttacacgggcaaggcaggta
gctccttcaattatttttctggacgaacttgactcgcttgcgcccattcgcggggcttct
ataagtgagcctcaggttacggcaagaatccttaatcagcttctctccgaaatggacggg
cttgaagagctcagggctgtagtagtaattggtgcaaccaatcgcccggacgttatcgat
cctgcacttatccggcccggacgttttgatgaactgattctcgttccgatccctgatgaa
ggagctcgcagggagatcttcaaagtccacaccgaaaaaatggaacttgcagaggatatt
gatatcgaaaagctcgtttctataaccgatcagtacacaggtgcagacattgcagctgta
tgtaaaaaggcaggaaggcttgctctgcgtgaggatattcacgcaaaaaatgttaagcag
agacacttccttaaagcaataacagaaactgggccttcagtaactccggatacaatgaaa
tactacgaggctataaaaggcgaactcaggacaaggaaatctaaggaaatcgagaatcct
tcctatatttga
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