Methanosarcina barkeri Wiesmoor: MSBRW_2729
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Entry
MSBRW_2729 CDS
T03839
Name
(GenBank) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSBRW_2729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbw03400
]
MSBRW_2729
Enzymes [BR:
mbw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSBRW_2729
DNA repair and recombination proteins [BR:
mbw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSBRW_2729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AKB51982
UniProt:
A0A0E3QNI7
LinkDB
All DBs
Position
complement(3534063..3534914)
Genome browser
AA seq
283 aa
AA seq
DB search
MSWTYRLKPEFFDLNYTLDCGQVFRWERNGDWWTGVVGDQVIRLSQDQGQLIVDSNLQPE
FLTRYFRLDDNLPSIYESINRDLLIDRAIRKYRGLRLIRQDPWECLISYMLSTASSIPTI
QKRIYLLSRSFGQEIEPGYFSFPDPETLANVDPAELDKCKLGFRTQNIIAAAEEVASGEL
DLDVLFRLEYRYARERLMRLRGIGEKVADCVLLFAFDKMEAFPVDTHIRQIIQHYHIDDS
YFETCKNMSCMGDWGREYFGHYCGYAQEYLYYQKRMEGFVQLY
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
ttgagttggacgtacaggcttaaacccgaattttttgatcttaactatacgctcgactgc
gggcaggtcttccgatgggagcgaaacggagattggtggacaggggttgtcggagaccag
gttatccggctttctcaggaccaagggcaactgattgttgattcaaatcttcagcccgag
tttcttactcgctatttccgccttgacgataatctgccttcaatctacgaaagcataaac
cgggatctgctgatcgacagagcaatccgcaaatatcggggcctgcggctgatcaggcag
gacccctgggaatgccttatttcctatatgctctcaacagcctcaagcattcccacaatc
cagaaaagaatctacctgctcagccggtctttcggtcaagaaatcgagccaggctatttc
agctttcctgaccctgaaactcttgcaaatgtcgatcccgccgagcttgacaaatgtaag
ctgggcttcaggacccagaacataatagccgcagccgaagaagttgcgtcgggcgagctg
gaccttgacgtgcttttccgcctggaatacaggtatgcgcgggaacgccttatgaggctc
aggggcattggggaaaaggttgctgactgcgtgcttcttttcgcttttgataaaatggaa
gcctttccagtagatacccacatcagacagatcatccagcattaccatatagatgacagt
tactttgaaacctgcaaaaacatgagctgtatgggggactggggaagggaatatttcgga
cactactgtgggtatgcccaggagtatttgtattatcaaaaaaggatggaggggtttgtg
cagctttattaa
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