Methanosarcina barkeri Wiesmoor: MSBRW_2926
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Entry
MSBRW_2926 CDS
T03839
Name
(GenBank) Uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSBRW_2926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbw03400
]
MSBRW_2926
Enzymes [BR:
mbw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MSBRW_2926
DNA repair and recombination proteins [BR:
mbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSBRW_2926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKB52179
UniProt:
A0A0E3QQ62
LinkDB
All DBs
Position
complement(3803492..3804037)
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AA seq
181 aa
AA seq
DB search
MMVEAGYETVTKEILKCTRCPLHKSAIKRVIGKGSCNPKVFFIGEAPGKRENETGIPFYG
RAGKKLDKMIEYMGLSEEDWMVTNTVKCHPPENRRPSINEIECCKPFLLSQIILLNPKII
ILLGNTAEKSFCPGKKLEWGVPVEHEGRTILKLYHPAALIYTSSKKEIQRAFIDKNRELW
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatggtggaagccggatacgaaactgttacaaaggagatacttaaatgcacccgatgc
ccactccataaaagtgcaatcaaaagagtcataggaaaagggtcctgcaacccgaaagtt
ttcttcataggagaagccccaggaaaacgcgaaaatgaaaccggaattccgttttacggc
agggcaggaaaaaaactggataaaatgatcgagtacatggggctttccgaagaagattgg
atggtaacaaatacagtcaaatgccacccccctgaaaaccgaagacccagtataaacgag
atagaatgctgtaagcccttcctgctttctcagataatcctgcttaacccgaaaattata
atccttcttggtaatacagccgagaagtccttttgccccgggaaaaaactcgaatgggga
gtccctgtggaacatgaaggaagaacaatcctgaaactttaccatcctgcagccctgatt
tacacctcttcaaaaaaagagatccaacgtgctttcatcgacaaaaaccgtgagctatgg
agctga
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