Methanosarcina barkeri Wiesmoor: MSBRW_3116
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Entry
MSBRW_3116 CDS
T03839
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSBRW_3116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mbw02000
]
MSBRW_3116
Transporters [BR:
mbw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSBRW_3116
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GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AKB52369
UniProt:
A0A0E3QPE6
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Position
4076625..4078409
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AA seq
594 aa
AA seq
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MKQIKHFMGLGLKVRLKRTIILTILVLTFCSTIFSLGAAGQEDSENNQTASEEGFFDRFI
TYVKSLFSGEGELQSSGEISKIGAADIQQSADSETAILRIATPDVIDSASLVGDTGLGVF
AHLSNPPLMKMDADGHIVGQLAENYSVSENNTRWTFYLRDDLYWSDGEKVTPEDVEFSIR
YYGEKTPWASWINDTLENSTVSDADNSVTFKFNKPYNRVSMEFATYDILPAHVWKNIDDP
VEYTNNGPYVGCGPYYLKLIDLNAGKLVFEKNPYWKGKDPEFKTVEIHFYSNVDVATLAL
KNGEADTYYKYAGSYPYSSIEELEKTGNFDFMEKTSIGLVFLAPNLKKAPFSDEEFREAL
AYAINYEELARLETLGYGEVPNRGFVPPSMENYKETEKLEYSPEKAREILEKAGYSDSNG
NGILEGKDGKDIKLEILIRSNYARTGELLDEYFENIGLSADLKTVDSDTWIALKDSYNYD
LTVTRSTPWGMLMHSSWGSGYFDSRRTGQGVMHNVEDPVFLQLCDDILATTDSAELQNYA
YELQDYYAENLPAIPLYWSKSVTPFNRHFEGWYADPLYGIYNLDTFTNVTKVEA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaataaaacactttatgggattgggattaaaagtaagattaaagcgaacgatt
atccttacaatacttgttcttactttttgctcaaccatattttctttaggagcggcaggg
caggaagattctgaaaacaatcaaacagcctcggaagaaggattttttgaccggtttatc
acatatgtaaaaagcctgttctcaggagaaggagaactacagagctcaggagaaatttcc
aaaatcggcgctgcagacattcagcagtcagcagattctgagacagcaattttgagaatc
gcaactccagacgtaatagactctgcgtccctggttggggatacaggtctgggagttttt
gctcatctttcaaacccaccactcatgaaaatggatgcggacggacatattgtagggcag
cttgcagagaattacagtgtatcggaaaataacacgcgctggactttctatctcagagat
gacctctactggagcgacggagaaaaagtaacaccagaagatgttgagttctcaatccgc
tactacggcgaaaaaaccccctgggcaagctggatcaatgataccctggaaaactcaaca
gtttcagatgccgacaattccgtgaccttcaaatttaacaagccctacaaccgagtcagt
atggaatttgcaacctatgatatccttcctgctcatgtgtggaaaaatatcgatgatcca
gtagaatacacaaacaacggcccttatgttggctgcgggccctactacctaaaactgata
gacctcaatgccggaaaactagtttttgagaaaaacccttactggaaaggaaaggatcct
gaattcaaaactgtcgagatccatttttactcaaatgtggatgttgccactctagccctt
aaaaatggagaagctgacacttactataaatatgcaggatcgtacccttactcaagtatt
gaggaacttgaaaaaactgggaattttgacttcatggaaaagaccagcatcgggcttgtt
ttccttgcccccaatttgaaaaaagccccgttttcagacgaggaattcagggaagctctg
gcctatgccataaattatgaagagcttgcaaggcttgaaacccttggatatggagaagtt
ccaaatcgtggttttgtgccgccatccatggaaaattataaggaaaccgaaaaactggaa
tacagtcccgaaaaagccagagagatcctggagaaagccggatactcggacagcaatggg
aatggaatactggaaggaaaagatggaaaagacataaagcttgaaatcctcatccgatct
aattacgcccgcacaggtgaacttctcgatgaatattttgaaaatatcgggctttctgca
gacctcaaaactgtagattcagatacctggattgctcttaaagatagttacaattatgac
ctgacagtaacgcgttccactccctggggtatgcttatgcactcaagttggggaagcggc
tactttgattccaggcggacaggccagggagttatgcataacgtagaagaccctgtgttc
ctgcaactctgcgatgacatccttgcaactacggattctgcagaacttcagaattatgca
tacgagctgcaggactattatgcggaaaatctgcctgcaattcccctctactggagcaag
tcggttactccatttaacaggcacttcgaaggctggtacgcggatcccctttacgggata
tataacctggatacttttacaaatgtaacgaaagtggaggcgtaa
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