Methanosarcina barkeri Wiesmoor: MSBRW_3186
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Entry
MSBRW_3186 CDS
T03839
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSBRW_3186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbw03019
]
MSBRW_3186
03110 Chaperones and folding catalysts [BR:
mbw03110
]
MSBRW_3186
03029 Mitochondrial biogenesis [BR:
mbw03029
]
MSBRW_3186
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbw04147
]
MSBRW_3186
Enzymes [BR:
mbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSBRW_3186
Messenger RNA biogenesis [BR:
mbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSBRW_3186
Chaperones and folding catalysts [BR:
mbw03110
]
Heat shock proteins
HSP60 / Chaperonin
MSBRW_3186
Mitochondrial biogenesis [BR:
mbw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSBRW_3186
Exosome [BR:
mbw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBRW_3186
Exosomal proteins of other body fluids (saliva and urine)
MSBRW_3186
Exosomal proteins of breast cancer cells
MSBRW_3186
Exosomal proteins of colorectal cancer cells
MSBRW_3186
Exosomal proteins of bladder cancer cells
MSBRW_3186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GTP-bdg_M
KIF9
Motif
Other DBs
NCBI-ProteinID:
AKB52439
UniProt:
A0A0E3QMV7
LinkDB
All DBs
Position
complement(4161122..4162732)
Genome browser
AA seq
536 aa
AA seq
DB search
MASKQIMFDENARKALLNGVDKVANTVKITLGPKGRYVVLDKSTKPVVTNDGVTIAKEIE
LHDKFENMGAKLVKEVASKTQDNTGDGTTTATLLAQSMIREGLKNISAGANPIDVKKGIE
MATENVVGYLKSKSSEVKGKEKIVQVATVSANNDEEIGNLIADAMERVGYNGVITVEDSK
TMETNLDVVEGMQFDRGFVSPYMATDSEKMVCEFEDPYILITDKKINSMKQIVPVLEKVA
SEGRSLLIIAEDVDGDAQAALILNIIRGALRVCAVKAPGFGNERKEMLEDIAVLTGGQVI
SEDKGMKLEEFDDYMLGSARKVTIDNNKTIIVEGKGDKAKIKERVSLIEAQINIADVEYK
KTELKKRQAKLGGGVAVIKVGAATETELKEKKMRIDDALNATKAAVEEGVVIGGGISLFR
AAAILDSLKLEGDREIGVKIVQRAIEEPVRQIAENAGKEGAEVVATIRAEPRELFGYNAK
KDVFEDLFEAGVIDPTKVVRSGLQNAASIAGMVLTTEALVTDFNDEKDEKAATIII
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaagcagataatgtttgatgaaaatgcaagaaaggcacttttaaacggtgta
gataaagttgcaaatactgtcaagatcactctcgggccaaagggacgttatgttgtactg
gataaaagtacaaaacctgtggtcacaaacgacggggtaaccattgcaaaggagatcgag
cttcatgacaagttcgaaaatatgggggccaagcttgtcaaagaagttgcttccaaaact
caggataataccggagatggaacaactactgcaactcttcttgcccagagcatgattcgg
gaaggcctgaaaaatatcagtgccggagcaaacccgatagatgtcaagaaaggtattgag
atggcaacagaaaatgttgtaggctatctcaagagcaagagtagtgaggtaaaaggtaag
gagaaaatcgtacaggtagctacagtttctgcaaataatgatgaagagattggcaatttg
attgccgatgccatggaaagagtcggctacaatggtgtaattactgttgaagactctaaa
acaatggagaccaatctggacgtcgtggaaggaatgcagttcgacaggggttttgtatct
ccttatatggcaactgattctgagaagatggtctgcgagtttgaggacccttacatcctt
atcacggacaagaaaatcaacagcatgaagcagatcgttcccgtgcttgaaaaagtcgcc
tctgaaggtcgttctctccttattattgccgaagatgtcgatggggatgcccaggctgct
ttgatcctgaatatcattcgtggggcactgagagtctgtgctgtcaaggctccaggattt
ggaaatgagagaaaggagatgcttgaagacattgccgtgctgactggtggacaggtaatc
agcgaagacaagggcatgaagcttgaggaattcgatgattatatgctcggaagtgccaga
aaagtcacaattgacaacaacaagaccatcattgtggaaggcaagggcgataaagcaaag
attaaggaaagggttagcctcattgaagctcagattaatattgctgacgtggagtataag
aagaccgaactcaaaaagcgccaggcaaagttaggaggcggggtcgcagtaatcaaggtg
ggagctgcaaccgaaaccgagctgaaagagaaaaagatgagaatcgatgacgcgctcaat
gccacaaaagccgcagttgaagagggtgtggttatagggggcggaattagtcttttccgt
gcagctgccattcttgactccctgaaacttgaaggtgatagagagataggtgtaaaaata
gtccagagagctatcgaggaacctgtacgccagattgctgaaaacgcaggtaaggaaggt
gctgaggtcgttgcaaccatcagggctgaaccccgcgaactctttgggtacaatgcaaag
aaagatgtctttgaagacctctttgaagcaggtgtcattgaccccacaaaagtagtcaga
agcggcctccagaacgcggcttcaattgctggaatggtacttacaaccgaagctcttgtc
acggacttcaatgacgaaaaagatgaaaaagcagctacgattattatctaa
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