Methanosarcina barkeri Wiesmoor: MSBRW_3712
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Entry
MSBRW_3712 CDS
T03839
Name
(GenBank) Eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MSBRW_3712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbw03019
]
MSBRW_3712
03012 Translation factors [BR:
mbw03012
]
MSBRW_3712
Messenger RNA biogenesis [BR:
mbw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MSBRW_3712
Translation factors [BR:
mbw03012
]
Eukaryotic type
Release factors
MSBRW_3712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_2
eRF1_3
baeRF_family10
acVLRF1
Vps36-NZF-N
Zn_ribbon_LysW
Zn_ribbon_DUF2089
Spectrin_3
Zn_ribbon_TFIIB
HypA
Motif
Other DBs
NCBI-ProteinID:
AKB52965
UniProt:
A0A0E3QQL1
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Position
complement(4832647..4833894)
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AA seq
415 aa
AA seq
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MTEQSAHEKYEFKKKLESLRDKKGRSTELISLYIPADKQIFDVTNQLKDEHGQAANIKSK
LTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAVDIGANKTNMESEVIVPPEPITVYKY
HCDSSFYLEPLEDMLKDKGTFGLLVLDRREATVGLLVGKRIEAFRNLTSTVPGKQRKGGQ
SSHRFQQLRLIAIHEFYKRIGDAADDIFLAVEPKDLKGILIGGPSPTKEEFYAGEFLHHE
LMRKILGLFDTAYTDESGLSELVNAAADKLQDLELMGQKNAVRAFFKELISDSGKVAYGE
TQVRANLEINAVDVLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGEAAPTAGNCPNCGA
SLEVTDVTDVVDELSDLADRSNAKVVFVSTDFDEGSQLMNAFGGIAAILRYSTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaatctgcacacgaaaagtacgaatttaaaaagaagcttgagagcctgagg
gataaaaagggaaggagtactgaactaatttctctttatatccctgctgacaagcagatt
tttgatgttacaaaccagttgaaagacgagcacggacaggctgcaaatatcaagtccaaa
cttaccaggactaatgtacagggggccattgaatctctcctttcaagactcagatatctt
gacaaggttcctgaaaacgggattgtttattttacaggagccgtggatatcggagctaac
aagacgaacatggagagtgaagtaattgtccctccggaaccaattactgtctataaatat
cattgcgactcctctttctatcttgagcccctggaggatatgctcaaggataagggcaca
tttggacttctagtgcttgaccgcagggaagccacagtagggcttcttgtcggcaagcga
atcgaggccttccgcaaccttacctcaacagttccgggaaaacagaggaaaggtggtcag
agttctcatcgtttccagcaactcaggttaattgctatccacgagttctataagaggata
ggagatgccgcagatgatattttcctcgccgttgaacctaaagatctcaaaggcatcctg
ataggaggtccttctcctacgaaggaagagttctatgccggggagtttcttcaccacgag
cttatgagaaagatccttgggctttttgatacggcttacaccgacgaatcagggctctcg
gaacttgtgaatgctgccgcagataagctccaggaccttgagctcatggggcagaagaac
gctgtcagagctttcttcaaagaacttatttccgactcggggaaagtagcctatggggaa
acccaggtacgggcaaaccttgaaatcaatgctgtggatgtacttctgctttccgaagac
ctgcgggcagaaagggtaaccacaaagtgcagtgtttgcggatatgaaaataagtggaca
cgtcgctggaaacctggagaagctgcacctacagccgggaattgtccaaattgtggagcg
tcccttgaagttacggatgttaccgatgttgttgacgagctctcggaccttgctgacaga
agtaatgcaaaagttgttttcgtgtctacagactttgacgaaggctcgcaacttatgaac
gctttcggaggcattgctgcaattctcaggtacagtactggagtctaa
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