KEGG   Methanosarcina barkeri MS: MSBRM_0115
Entry
MSBRM_0115        CDS       T03838                                 
Name
(GenBank) DNA polymerase sliding clamp protein PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
mby  Methanosarcina barkeri MS
Pathway
mby03030  DNA replication
mby03410  Base excision repair
mby03420  Nucleotide excision repair
mby03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSBRM_0115
   03410 Base excision repair
    MSBRM_0115
   03420 Nucleotide excision repair
    MSBRM_0115
   03430 Mismatch repair
    MSBRM_0115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mby03032]
    MSBRM_0115
   03400 DNA repair and recombination proteins [BR:mby03400]
    MSBRM_0115
DNA replication proteins [BR:mby03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSBRM_0115
DNA repair and recombination proteins [BR:mby03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSBRM_0115
   MMR (mismatch excision repair)
    Other MMR factors
     MSBRM_0115
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    MSBRM_0115
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9 Rad1
Other DBs
NCBI-ProteinID: AKB53113
UniProt: A0A0E3QRI7
LinkDB
Position
complement(123680..124417)
AA seq 245 aa
MFKAAINAELLKDAVAALAVIVDEVRFKINPEGISVKAVDPANVAMGIFELGSSAFDEYN
ADECEIGVDLNKITDLLGIADKNDTVRMELEEENHKLLIDVGGLSYTLSLLDPSTIRAEP
RVPQLELPAKVVLNGADLRRAVKAAEKISDHMLMGVSDDTFYMEAKGDTDQVRLEMGRDQ
LIDLKAGEACSLFSLDYLTDIVKPTNKVNEVTLSLGKDFPILIDFEIANGSGRISYLLAP
RIESD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtttaaggcagcaattaatgcagagcttctgaaagacgcggttgccgcactagctgta
attgtagatgaggtcagattcaaaataaaccctgaaggtatttcggtaaaagccgttgat
cctgccaatgttgcaatgggaattttcgagcttggatcatctgctttcgacgagtataac
gctgatgaatgtgaaatcggagtcgacctgaacaagattacagacctactgggaattgcg
gataagaatgacacagtccggatggaacttgaggaagaaaatcacaaactcctgattgat
gtcggagggctgtcttatacactttctcttctcgatccttctacgattcgagcagaacca
agagttccacaactcgaattgcctgccaaagtagtccttaacggtgcagacctcagacgt
gctgttaaagctgccgaaaaaataagtgaccatatgcttatgggagtttcggacgataca
ttctatatggaagcaaaaggcgataccgatcaggtccgtctcgaaatgggtagggatcag
ctaatcgatctgaaagcaggcgaagcatgttctctgttctctctggattatctgaccgat
atagttaaacccacaaacaaagtcaatgaagttactctctcccttggaaaagacttccca
atactcatagatttcgaaattgcgaatggttcaggaaggatttcttacctcctggctcca
agaattgagtcggactga

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