Methanosarcina barkeri MS: MSBRM_0559
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Entry
MSBRM_0559 CDS
T03838
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mby
Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mby03400
]
MSBRM_0559
DNA repair and recombination proteins [BR:
mby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSBRM_0559
Archaeal homologous recombinant proteins
MSBRM_0559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_29
ABC_tran
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AKB53557
UniProt:
A0A0E3QSK5
LinkDB
All DBs
Position
complement(700647..703871)
Genome browser
AA seq
1074 aa
AA seq
DB search
MKLKNLHIENIRSYKKLDFTFEDGVTVISGVNGSGKSSLLEACFMGLFGSKILSKDFVLA
DVIFKGAENAKINLGFEHLGQDYLIEQAFRYSSKSESASNSKCVLYANGESIVDQATRTY
EEVCSLLNMDEEAYRNCAYIRQGEIDVLINAKPKDRQRMIDGLLQLGKLEEYRERAGSAK
TAVRRLQRDTSKSLSSVKAEIEGIESTEPHAVLNGLKQKIKENDTILKKCNENKEAAAAQ
KEKLDLMITEHREHLQEIQTLKQVLAKSQEDKAGCIREKENFARESHEQRQALLGLGEEN
KLIREECGFGNLEIEALSMQQEKEEFLAREKVNAISKELALLLREEEVHTQALHDLENEK
AETEQILRQCRADIGTTNGAIEENRKNILRIEDESKKLKEAAKETTGFTDSYELPLFINE
LEEKESLLRERKNEASTKLALAFKEKETGDINLLTLDKELQNSRVAVRKSKTEIEILEED
LRENDKAVLEVKEQKSEASAGLKGLGFTGEQLEDLEYLSELLLENKNRLHGREKELEATV
RELDKVIRKNQQLLAEGKCPTCGQDLKGSEIACTTGESEQKREKLAAELLDIKLQQAEVE
KKLNRLKDAKKLEKRISDYDLETERLKNKAKDLQERISIHKTRTEEDSLKLEGLNKQKEE
LEAKMGKLLPDIKALQGWEAAAQKAHGESERVLREAKAFEKKLAENTSEIESLNGKIRTS
LALIENYGQRLGELNEKIKGLAERETQEKEKLKTLEIELEALRKKEAMAKETHEESSKRL
LKTKKLGANLIQMDNVKHKISELEASIRNLAEKVGFFDREILERNERVKQLEGKLQGSRF
EDLQSKRTQLEEYQANLTEKTRQITSTKDALLKEVGMVENSLKRRNELKEELKALENRKQ
YLEAVYSNAEELESMYMHVRADMRTKNIGALSILLNEMFNFMYTNNAYSHIELDPEYNLT
VYRKDGTPLEPKLLSGGERAIFNLVLRCAIYRLLALGFGGDRADGLPPMILDEPTVFLDR
GHINQLLKLIDMMRGIGVGQIIVVSHDESLIDSADHVFQVEKDPITNMSSIVKL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctcaaaaacttgcatattgaaaacatccggagttataaaaaactggattttaca
tttgaagacggagttacagtcatttccggggtgaacggaagcgggaagtcaagcctgctt
gaagcatgttttatggggcttttcgggagcaaaattctttcaaaggacttcgtgcttgca
gatgtaatcttcaaaggagctgaaaatgcgaaaataaacctgggttttgagcatttagga
caggattatcttatagaacaggctttcaggtattcttctaaaagtgagagcgcttcgaat
tcgaaatgtgtgctctatgccaatggggaaagtattgtcgatcaggctacacggacttac
gaagaggtctgttctcttctaaatatggatgaagaagcgtacagaaactgcgcttacatc
aggcagggcgaaattgatgtactcattaacgcgaaaccaaaagacaggcagcgaatgatc
gacggcttgttgcagcttggaaagctcgaagaatacagggaaagagcaggaagcgcaaaa
actgctgtaagaaggcttcaaagggacacgagtaaaagcctttcgagcgtaaaagccgaa
attgaggggattgaaagtacagaaccgcatgctgttttgaatgggctcaagcagaagata
aaggaaaacgatactatcttaaaaaaatgtaatgagaataaagaggctgcagccgcccag
aaagaaaaactcgaccttatgatcacagagcacagggaacatctccaggaaatccagact
ctgaaacaggtcctggctaagtctcaggaagacaaggcaggctgtatccgggaaaaagaa
aacttcgccagagaatcccatgaacaaaggcaggcactgctcggactgggagaagagaat
aagcttattcgagaagaatgtgggtttgggaaccttgagattgaggctctgagcatgcag
caggaaaaagaggagtttcttgctagggaaaaggtaaatgcgatctcaaaagagcttgct
cttctcctcagagaggaagaagttcacactcaggctctacatgaccttgaaaacgaaaag
gctgagaccgaacagattttaaggcagtgcagggcagatattgggactacaaacggggca
attgaagaaaacagaaaaaatatactgagaatcgaagatgagagtaaaaagctaaaagaa
gctgcaaaagaaactacaggcttcacggactcttatgagcttcctttgtttataaatgag
ctggaagaaaaagaaagccttctgcgcgaacggaaaaacgaagcctcaacaaaacttgca
cttgctttcaaagaaaaagaaacaggagacataaatctcctcacgcttgataaggaactt
caaaactccagggtcgcagttaggaaaagtaaaaccgagatagaaatccttgaagaggat
ctcagggaaaatgataaggcagttctggaagtcaaggagcaaaaatccgaagcttctgca
gggttaaaaggacttggctttaccggagagcagctcgaagacctggagtacctcagcgaa
cttctgctggaaaacaaaaacaggctgcatgggcgggaaaaagagcttgaagctactgtc
agggagcttgataaagttatccgtaaaaaccagcagctacttgccgaaggaaaatgccct
acatgcgggcaggatcttaaaggctctgaaattgcatgcacaaccggggaatccgaacag
aagagagaaaaacttgcagcagaacttcttgatataaagctccagcaagccgaagtcgag
aaaaaacttaatcggctcaaggatgccaaaaagctggagaagcgaatttcggattacgac
ctggaaaccgaaagactcaaaaataaagcaaaagacctgcaagaaaggatatctatccac
aaaacccgaaccgaggaagattcccttaaacttgaagggcttaataaacaaaaggaagaa
cttgaggctaaaatgggcaagcttcttcccgatattaaagccctgcagggatgggaggcg
gcagctcaaaaagctcatggtgagagtgaaagagtacttcgagaggcaaaagcctttgag
aaaaagcttgctgaaaatacctcggaaatagagagcctgaacgggaaaatcaggacttcc
ctagcactgatcgaaaattacgggcagagacttggagagctcaatgagaaaataaaaggg
cttgccgaacgagaaactcaggaaaaggaaaaactcaaaaccctggaaattgagcttgaa
gccctgaggaaaaaagaagccatggcaaaagaaacccatgaagaaagttcaaagcgtctc
ttgaagacaaaaaaactcggagcaaacctgatacagatggataacgtaaagcacaaaatc
tccgagcttgaggcttcaatcaggaaccttgccgaaaaagtcggcttttttgaccgggaa
atccttgaaagaaacgagcgggtaaaacagcttgaaggaaagctacaaggaagcaggttc
gaagaccttcagtcaaagcgtacccagcttgaagaatatcaggcaaaccttactgaaaaa
acccggcaaataacgtctaccaaagatgcgctcttaaaagaagtggggatggttgaaaat
agtttaaaacgccgtaatgagctgaaagaagaactaaaagcccttgagaacaggaagcag
tacctcgaagccgtatatagcaacgccgaagagcttgagagcatgtatatgcacgttcgg
gcggatatgcggacaaaaaacattggggctctttcgatccttttgaatgaaatgttcaac
ttcatgtacacaaataatgcttattcacatatcgaactcgacccggaatataacctcacg
gtttatagaaaagacggcaccccccttgaaccaaaactccttagcggaggagaacgtgca
atctttaaccttgtcctgcgctgtgcgatctacaggcttcttgctctgggttttggcgga
gatagggcagacgggcttccccccatgatccttgacgagcctacagttttcctggaccgc
gggcatataaaccagcttttgaaactcatagacatgatgcgcggcataggcgtaggccag
attattgtggtctcccatgatgaatcacttatagattcggcagaccatgtcttccaggta
gaaaaagaccctattaccaatatgtcgtctattgtaaaactttaa
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