Methanosarcina barkeri MS: MSBRM_0675
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Entry
MSBRM_0675 CDS
T03838
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mby
Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mby03016
]
MSBRM_0675
Enzymes [BR:
mby01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MSBRM_0675
Transfer RNA biogenesis [BR:
mby03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MSBRM_0675
Prokaryotic type
MSBRM_0675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AKB53673
UniProt:
A0A0E3QT35
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All DBs
Position
complement(877406..878317)
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AA seq
303 aa
AA seq
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MLRITFLGTGGSLPTRNRNPSAVMVNREGELILFDCGEGTQQQMMRAKTGMMNLSSIFVS
HFHADHFLGIPGLIQTMSFMGRKEPLLIYGPEGTREFTELFKALGYFNLKYEVQGVQLKP
GDVVEREKYVIRALKTEHSISSLGYALIENPRPGRFNREKAIELGIPPGPLFSKLQKGKT
VEVNGKLIKPEDVMGTLRPGRTIVYSGDTRPCEPILEASRDADVLIHDGSFADEMADWAE
ESKHSTAGEVAALAKEAGVRRLILTHISSRYTDDAEPLLIDSKKVFENVIIAEDLMEIEV
PYR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtataacttttcttggtactggaggttctcttccaacccgtaatagaaaccca
tcggcagtaatggttaatagggaaggagagcttatcctgttcgactgcggagaaggaacc
cagcagcagatgatgagggcaaagacagggatgatgaacctgtcctctatttttgtcagt
catttccatgcggaccattttctgggaattcctggcctgatccagaccatgtctttcatg
ggaaggaaggaaccccttctgatttatggccctgagggaaccagggaatttactgagctt
tttaaagctcttggctatttcaaccttaagtacgaggtccagggtgtccagttgaaaccc
ggcgatgttgttgaaagagaaaaatatgtgatccgggctttaaaaaccgaacacagcatc
tcaagccttggatacgcacttatagaaaatcctcgcccaggacgtttcaacagggaaaag
gcaattgaactggggattcctccgggtcctcttttctcaaaattacaaaaaggaaaaacg
gtagaagttaatggaaagctcataaaaccagaagatgtaatgggaaccttaaggccaggg
cggactattgtatacagtggagataccagaccctgtgagcccattctcgaagcaagccgg
gatgcagatgtactgatacatgatggaagttttgcagacgagatggcagattgggctgaa
gagtcaaaacattcgacagcaggggaagtggcagccctcgcaaaggaggcaggagtcagg
aggctgatccttacccatataagctcccggtataccgatgatgctgaacctctcttgata
gattcaaaaaaagtgtttgaaaacgtaattatagctgaagatctgatggaaattgaagtc
ccgtacaggtag
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