Methanosarcina barkeri MS: MSBRM_0888
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Entry
MSBRM_0888 CDS
T03838
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSBRM_0888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mby03021
]
MSBRM_0888
Enzymes [BR:
mby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSBRM_0888
Transcription machinery [BR:
mby03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSBRM_0888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
CBP66
Motif
Other DBs
NCBI-ProteinID:
AKB53886
UniProt:
A0A0E3LMZ6
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All DBs
Position
1165771..1167003
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AA seq
410 aa
AA seq
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MSISESTIDSMIKDLPLPSNILNTLREDVIKAGVSKKEMEEIVEQVMEEYHTSCIEPCDA
AGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKE
NPEDYAYDREKTRALAWEIEATKIDHIADVTTDLSQMKLIIDLHEKAMEGRNITIDQVKE
KFNEELNVMVTISPDIDNQIIIAPGEPSYRELLQLAKSIHNVTLKGIEGIKRVVVRKEGE
EYTLYTEGSALREVLQFDGVDKTRTSTNNINEIYEVLGVEAARNAIIKEATDTLREQGLT
VDIRHIMLVADLMTCDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGDVDQLQ
GVTENIIVGQPIRMGTGDVHLITRRREEIEEAVKAAEAAEAVKAAEAAEE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagtgaaagtacaatcgatagtatgataaaggatctgcccctcccttcgaat
atccttaatactctaagagaggatgtcatcaaagccggagtaagtaagaaggaaatggaa
gagattgtagaacaggtaatggaagagtatcatacctcatgcattgagccctgtgacgct
gccggtgtggttgcagctcagtccataggggagccgggtacccagatgacaatgcgtacc
ttccactacgctggtgtggccgagattaacgttactctcggtctgccccgtcttatagaa
attgtggatgctcgaaaaattccgagtactcctatgatgacaattgccctttctaaagag
aatcctgaagattatgcttacgacagggaaaagacaagagctcttgcctgggagattgaa
gcaacgaaaattgaccatatcgctgatgtgaccactgatctttcccagatgaaattgata
attgacctgcatgagaaggcgatggaaggcaggaatattactatagatcaggtaaaagaa
aagttcaatgaagaattgaacgtaatggttaccatttccccggatatagataaccagatt
atcattgctccgggagagccttcttacagggagcttctccagcttgcaaaaagtatccac
aatgtcacccttaaagggatagaaggaatcaaacgtgtggtagtccgcaaggaaggagaa
gaatacacactatataccgaaggttcggccctgcgtgaagtgcttcagttcgatggtgtg
gacaagacaagaacaagtacaaataatattaacgaaatttatgaagtgcttggagtcgaa
gctgcaaggaatgcgattattaaagaagcgacagacaccctgcgcgaacagggtcttact
gtggatatccggcatattatgctcgtggccgatctcatgacctgtgatggggaagtaaaa
cagatcggaaggcatggaatttcaggtgaaaaggcaagtgtctttgcccgtgcagctttc
gaagttacggtaaatcatctgctggatgcagggatgcgtggggatgtggatcagctccag
ggggtcacggaaaatattatcgttggccagcctatccgtatgggtacgggagacgtgcat
cttataaccagaagaagagaggaaatcgaagaagcagtaaaagctgcagaagcagcagaa
gcagtaaaagctgcagaagcagcagaagagtga
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