Methanosarcina barkeri MS: MSBRM_1008
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Entry
MSBRM_1008 CDS
T03838
Name
(GenBank) HTH DNA-binding protein
KO
K07728
putative transcriptional regulator
Organism
mby
Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mby03000
]
MSBRM_1008
Transcription factors [BR:
mby03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSBRM_1008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
MerR
HTH_11
MerR_1
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AKB54006
UniProt:
A0A0E3LN20
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All DBs
Position
complement(1326647..1327630)
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AA seq
327 aa
AA seq
DB search
MTKEVLIHQIIDVLARAGFALSDRCNIRPRSFDVAARKDETLLLCKVLFNIDGLNEETAR
EMKYLAEYLGGSAIVVGAKTRDQMLEDSVVYMRYDILALNVQTLYDYFIENVPPLVSAAP
GGLYVSIEGDLLKKARMGQSMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLQLEDIFG
VELAKPINILQSCGSRKPRKKAESRTKTQEKPCTLLPEDLILNTISMLGYDVLPTAQAPF
KAISRDESSVILTGVSEFNTTVVKRAHLMSSISCVTETQSVFIINGHSKIKSVENTVMIE
KKELDKISDSQELLTFIEERRETHEEK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaggttctcatacatcaaattatcgatgtattagcacgtgcgggttttgca
ctctccgatcgctgtaatattcgtccgaggagctttgatgttgccgcacggaaagatgaa
acactattactttgcaaggttttatttaatattgacggcctgaatgaagaaactgccagg
gagatgaagtaccttgccgaataccttgggggctctgctattgttgtgggggcaaagacc
agagaccagatgcttgaagatagcgttgtgtatatgcgttatgatattcttgccctgaat
gtacagactctttacgattactttattgaaaatgttcctcctcttgtttcagcagctccg
ggcgggttatacgtctctatagaaggagatcttcttaaaaaagccaggatgggtcagtca
atgtctcttggaactcttgcctccatggtaggggtttcaaggagaactatcagcaaatac
gaagaagaaggcatggacgcgtcgatagatgtcgtactccagctggaagatatctttggg
gttgagcttgcaaagcccataaatatcctgcaatcctgcgggagcaggaagccccgaaag
aaagcagaatccagaaccaaaacccaggaaaaaccctgtacgcttttaccggaagatttg
atccttaacacaatttccatgcttggctatgacgtccttcctactgcgcaggctcctttc
aaggccatatcacgggacgaatcctcagttatccttacaggagtcagcgaattcaatacg
acagtggtcaaaagggctcatttaatgagcagtatttcctgcgtcactgagacccaatcc
gtgtttatcatcaacgggcactcaaaaataaaatccgtagaaaacacggttatgatcgag
aaaaaagaacttgataaaataagtgattctcaagagctccttacctttatagaggaacgt
agagaaactcacgaagaaaagtaa
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