Methanosarcina barkeri MS: MSBRM_1011
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Entry
MSBRM_1011 CDS
T03838
Name
(GenBank) Cell division protein FtsH
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mby
Methanosarcina barkeri MS
Pathway
mby04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MSBRM_1011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mby03019
]
MSBRM_1011
03009 Ribosome biogenesis [BR:
mby03009
]
MSBRM_1011
04131 Membrane trafficking [BR:
mby04131
]
MSBRM_1011
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mby04147
]
MSBRM_1011
Messenger RNA biogenesis [BR:
mby03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MSBRM_1011
Ribosome biogenesis [BR:
mby03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MSBRM_1011
Membrane trafficking [BR:
mby04131
]
SNARE
SNARE associated proteins
Others
MSBRM_1011
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MSBRM_1011
Exosome [BR:
mby04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSBRM_1011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
TIP49
AAA_22
AAA_2
AAA_14
AAA_33
IstB_IS21
AAA_28
nSTAND3
RNA_helicase
AAA_25
AAA_7
AAA_18
Mg_chelatase
Sigma54_activat
Parvo_NS1
NPHP3_N
ATPase
DUF815
AAA_17
AAA_24
DUF5906
Zeta_toxin
bpMoxR
ABC_tran
SLFN-g3_helicase
TsaE
NB-ARC
PhoH
Vps4_C
AAA_lid_PRS2_C
MlrA_helical
Motif
Other DBs
NCBI-ProteinID:
AKB54009
UniProt:
A0A0E3QSW7
LinkDB
All DBs
Position
1330724..1333051
Genome browser
AA seq
775 aa
AA seq
DB search
MEEIQLKVEKAYPIDLGRGIIRLDPTTLLKLQLSPGDIVEIRGKKKTTAKVWRADRQDWD
QGLVRIDNFIRQNAGVSIGEKVTIKKVEAPEAKKLVLALPESMMQGGPELQFGEHANEII
KRHILKRPVFRGDIIPIINSMSQPMTESLTTSQVIPLVAVETDPANTIVLVTEATLIELR
KKPVQGYEKATRGVTTYEDIGGLGAEIMRVREMIELPMKHPELFAHLNIEPPKGVILYGP
PGTGKTLIAKAVANESGASFHYIAGPEIVGKFYGESEERLRKIFEEATQDAPSVIFIDEI
DSIAPKRENVTGEVERRVVAQLLTLLDGMVERGQVVVIGATNRVDAIDPALRRPGRFDRE
IHIGVPDTKDRYEILQIHTRGMPIERDEEPEEIEKVETEADEAALERERKEKADKYLMYL
AERTQGFVGADLLALVQEAAMRCLRENLPDLDLENEPVPPERLEKIVVTKKNFEDALMEA
EPSALREIYVEMPTVSWNDVGGLDEAKQSITEAVEWPIKNPEKFAHMGIKAPRGILLYGP
PGTGKTLIAKAVAKESNANFISVKGPEIFSKWLGESEKAIRETFRKARQVAPCVIFFDEI
DSIASMPGMESTDSHTSERVLNQLLTEMDGLESLRDVVVIAATNRPNLLDPAILRPGRFD
RLVYIGSPDKKGRLKIFRIHTKGTPLADDVDLEALADITEGYVGADIESVCREAVMIALR
ENFDAESVEMRHFREALKKVKPTITENIAQFYEKIEAQFKGGQRLTETAGYIGYR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatacagttgaaggttgaaaaagcatatcctatcgaccttggaagaggaatt
atccgacttgaccctacaactttgctgaagcttcagctctcaccaggcgacatcgtggaa
ataagaggtaagaaaaagaccacggcaaaggtatggagagctgacaggcaggactgggac
cagggactcgtgagaattgataacttcatccggcaaaatgcaggcgtttccataggagag
aaggtaactatcaaaaaagttgaagctccggaagcaaaaaagcttgttttggcgcttcct
gaaagcatgatgcaggggggacctgaacttcagtttggggaacatgcaaatgaaatcata
aaacggcatattctcaaaaggccggttttcaggggggacatcattcctataataaattcg
atgtctcagccaatgacagaatcccttactacaagccaggtaatccctctggttgctgtt
gagactgaccctgcaaacacgattgttcttgttacggaagcgacgcttatcgaacttcgt
aaaaagccggttcaggggtatgaaaaagcaacccggggcgtgactacttatgaagatata
ggaggcctcggggctgagatcatgcgtgtccgggaaatgatagagctgcccatgaagcat
cctgaacttttcgcccaccttaatatcgaacctccgaaaggagttattctctatggccca
cccggaaccggaaaaactctgattgcaaaagccgtagccaatgaatccggggcaagtttc
cattacattgccggccctgaaattgtagggaaattctatggagaaagtgaagaaaggcta
aggaagatcttcgaggaagcaactcaggatgcgccgtcggttatttttattgatgaaatt
gattccattgctcctaaaagagagaatgtaacaggggaagtggaaaggcgtgtggtcgcc
cagctcttgactctgcttgacgggatggtagagagaggccaggttgtggttataggagcc
acaaatcgtgtggatgcgattgatccggcactccgaagaccaggccgctttgacagagaa
atccatataggtgtgcctgataccaaagacagatatgaaatcctccagatccataccagg
ggtatgcccatagaaagggatgaggaacccgaggaaatcgaaaaagtcgaaaccgaagcg
gatgaagctgccctggagagggaaaggaaagaaaaggcagataaatatctgatgtatttg
gctgaaaggacccaggggtttgtaggcgcagatctgctggctcttgtacaggaagctgcc
atgcggtgcctgagggaaaatctgcctgaccttgatctggaaaatgaaccagttcctcct
gaaaggctggaaaaaatcgttgtaaccaagaaaaactttgaagatgccctgatggaggcc
gaaccctctgctctaagagaaatttatgttgaaatgcccacagttagctggaatgatgtt
ggagggctcgatgaagcaaagcagtccattactgaggctgtggaatggcccattaaaaat
ccggaaaagttcgctcacatgggtataaaagctccaagaggaattttgctttacggccct
ccaggaactggaaagaccctgatagcgaaggctgttgccaaagagtcaaatgctaacttt
ataagcgtcaaagggcctgagattttctcaaagtggcttggagaatcggaaaaagctatc
agggagaccttcaggaaagcacgacaggtcgctccctgtgtgattttctttgacgaaatt
gattcgattgcttctatgccagggatggaatctactgacagtcacacttctgagagggtg
cttaaccagcttctgaccgagatggacgggcttgagtctcttagagatgtggtggtgatt
gccgcaaccaatcgccctaaccttctggaccctgcgatcctgcgtccaggacgttttgac
aggttggtttatattggttctcctgacaagaaaggcaggcttaaaatcttcaggatccat
acaaagggtacacctcttgctgatgatgtggaccttgaagcccttgccgacataactgaa
gggtatgtaggtgccgatattgagtccgtttgcagggaagccgtaatgattgccctgagg
gagaatttcgatgcagaatctgtagaaatgagacacttcagggaagctctgaagaaggta
aaacccacaattacggagaatatcgctcagttctacgaaaagatcgaggcacagtttaag
ggaggccagagacttacagaaacagctggctatatcggttacaggtaa
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