Methanosarcina barkeri MS: MSBRM_1090
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Entry
MSBRM_1090 CDS
T03838
Name
(GenBank) Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mby
Methanosarcina barkeri MS
Pathway
mby02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSBRM_1090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mby02000
]
MSBRM_1090
Transporters [BR:
mby02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
MSBRM_1090
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Pro_isomerase
Motif
Other DBs
NCBI-ProteinID:
AKB54088
UniProt:
A0A0E3QTP5
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Position
1443039..1444712
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AA seq
557 aa
AA seq
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MEKKKLLFSIFLTALILITAGCANKDNTQAGASAENASDQTGALVENPSDGSKYVDVVNL
SGGDCGYPQPFTIYPRGPGSSKVGMIFDSLFERDEKGIIPWLAESWDVNSNGTEYTVYLR
DGVNWSDGVPFTANDVKFTFDYEQKNVPISGGIESGIIDNVQVVNSSTVKFVLTQPASPF
IYKLTSFKIIPEHIYKNVSDPTSFLDPEAVIGTGPFILDEYNKEHGTYRFVANENFWGPE
LAVKAVEFIPVSDSLIAFEQGQIDFTSISPDTLDRFKSDSDIRIVQQPAFWGYQFYFNMK
KCPELNNSRIRQAFAYAIDRDELVEKIARGAGKAGKMGILPEDHIWYNSDQPKYDYNPDK
ARALLEEAGWTDTDGDGILDKNGEKLSYVLSLGSNEVRIGELIKERLSEVGIDVQVKALE
SKSRDANLKSGDFELAISGFGGWGQDADYLRTRYCDTGAQSGSVSSGAAIFGYHNDTLND
LGTQELQELNDSKRKEIVYNMQIVLANDVPAIPLYYTTSYDVWRISKYDGWMNRYDHHAR
THSILSYLERDGIATKR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaaaagttattattttctattttcttgacagcactgattttaataacggcg
ggctgtgctaataaggacaatactcaggccggagcatcggctgaaaacgcttctgatcag
acaggggcattggttgagaacccttccgacggatcaaagtatgtggatgttgtaaatcta
agcggaggagattgtggctatccacagccgtttacaatatatccgaggggtcctgggtca
tcaaaagttggaatgatctttgacagcctgttcgaaagggatgaaaaaggtataattccc
tggttggctgaaagctgggatgtcaattcaaatggaacagaatatacagtttatctccgt
gacggtgtcaactggagcgatggagtgccttttacggcaaatgatgttaaatttactttc
gattacgagcagaaaaatgtgcccatatcaggtggaattgagtccggtattatagataat
gttcaggttgtgaattccagtaccgtcaagttcgtactcactcagcctgcttctccattc
atttataagctcacgagttttaaaatcatacctgagcatatatacaaaaatgtctccgat
cctaccagtttccttgatccggaagcagtcattggcactggcccgttcattcttgatgag
tacaacaaagagcatggaacatatcggtttgtagcaaatgagaatttctggggaccggag
cttgccgttaaagccgtcgaatttattccggtcagcgactcattgatagcttttgaacag
ggacaaatagatttcacaagtatatcgcctgatactcttgaccggttcaaatcagattct
gatataagaatagtccagcagccggctttctggggttaccagttttatttcaatatgaaa
aaatgtcctgaactaaataacagtagaataaggcaggcctttgcttacgccattgatcgc
gatgaactggtggaaaagatcgcaagaggtgcaggcaaagccggtaaaatgggcatactc
cctgaagaccatatttggtataactctgaccagccaaaatatgattacaatccggataag
gctcgagcattgcttgaagaagccggatggactgacacagatggggatggaatacttgat
aaaaacggggaaaaactgtcatatgtattatctcttggcagtaacgaagtccgtatcggc
gaacttataaaagagagactgagtgaggtgggaattgacgttcaggtgaaagcccttgag
agtaaatcccgtgatgccaatctaaagagcggagactttgaacttgcgatcagcggcttt
ggcggctgggggcaggatgcggattatctccgtacaaggtactgtgacacaggtgcacag
tcaggaagtgtatcatctggcgcagcaatatttggttaccacaatgataccctgaatgat
cttggcactcaggaattgcaggaattgaacgatagtaaacggaaagaaatagtatacaat
atgcagatcgtacttgctaatgatgtacccgcaataccgctctattatactacatcatat
gatgtatggcgcatttcaaaatatgacggctggatgaatagatacgatcaccatgcaaga
acacacagtattctttcgtatttagagagggatggaattgcaacaaaaagataa
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