KEGG   Methanosarcina barkeri MS: MSBRM_1116
Entry
MSBRM_1116        CDS       T03838                                 
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mby  Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:mby00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mby02048]
    MSBRM_1116
Enzymes [BR:mby01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     MSBRM_1116
Prokaryotic defense system [BR:mby02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   MSBRM_1116
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N Helicase_C DUF4145 SNF2-rel_dom HSDR_N_2 SAM_KSR1 SLFN-g3_helicase AAA_19 Snapin_Pallidin
Other DBs
NCBI-ProteinID: AKB54114
UniProt: A0A0E3QS68
LinkDB
Position
complement(1474325..1477765)
AA seq 1146 aa
MTNFAFLEAEWPSLYEAAEKASNAVYPDPRTACFYARRALELAVQWIYKYDYSLLLPYQE
NLSALIHEPTFKKVAGEAIFNKARIIIRLGNEAVHSNSSIQAYDSVTAVSELFHITYWLA
RTYARKEKPEPGLSFNPDDLPKTTVPKQTIEQLQNLETSLREKDEKLSELLADKSAMDEE
LKRLRAEVAKAKEASALQPDTHDYSEAETRDYFIDLLLKEAGWALDKDQDREFEVSGMPN
ESGVGFVDYVLWGDDGKPLALVEAKRTTRDPQVGQQQAKLYADCLEKQFGQRPVIFYSNG
YENWIWDDSRYPPRQVQGFYKKSELELLIQRRSSRRSLSEAKINSKIADRYYQTRAIRRI
GESFEHDNDRKALVVMATGAGKTRTVIALCDLLMRCNWVKRVLFLADRVALVNQAVNAFK
RHLPDSAPVNLVTEKDTDGRVFVSTYPTMMKQIEEMNNGQRRFGSGHFDLVIIDEAHRSV
FKKYKAIFNYFDSFLVGLTATPKNEIERNTYSLFDLEPGVPTDAYQLEEAVKDGFLVPPK
AVSVPLKFQRQGINYDDLSDEDKEQWESLDWGDEDEEIPERVEAEAVNKWLFNKDTVDKV
LAHLMERGLKVAGGDRLGKTILFAKNQAHAEYIAERFNANYPNFKGEFARVITFKTEYAQ
SLIDNFSVKEKAPHIAISVDMLDTGIDVPEVVNLVFFKLVRSRTKFWQMVGRGTRLCPDL
FEPGKDKQFFYLFDYCQNLEFFSQNPETTDGSLGDSLGTRLFKSRLELLSELDRKLESDS
DCATGAEASEIYGEPKTEAEVRFSVAETLQNEIASMNLDNFVVRPRRRLVEKYSKPEAWI
KLSSEDLSEISHEVAGLPSELQPEAEEAKRFDLLVLNLQLALLRAEPAFERLSNQVREIA
GLLEEKSAIPMVRDQMALILDVQTDEWWENVTTPMLETLRRHLRNLVKLIEKHHRKPLYT
DFEDEIGSETDVELPGFAEAGDFEKFRAKTRAFLLEHQDNTVIHKLRMNIPLTVTDLDEL
ERILSESGLGGPEEIARAKEMSHGLGLFVRSLIGLDREAAKQSLTTFLKGKTLTANQIEF
INLIIDHLTEHGAMDAALLYESPFTDLTPQGPDGLFTSTQIDELIDTLEQITATALVPPC
SQQITA
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgaccaattttgcctttctcgaagccgaatggccttctttgtatgaggcagccgaaaaa
gcctcaaatgcagtttatcctgaccctcgcactgcctgtttttacgctcgcagggctctg
gaactggctgtgcagtggatatataagtacgattattcactgctcctgccgtatcaggaa
aatttgagtgctctcattcatgagcctacattcaaaaaagttgcgggagaggcaatcttc
aacaaagcacgtatcattatccggcttggaaacgaggctgtgcacagcaacagttccatt
caggcatatgattcagtgacagccgtgagtgaacttttccacattacctactggctggca
cgcacctatgcgcgaaaagaaaagcctgagcccgggctgagcttcaaccctgatgacctt
ccaaaaacaacagtcccgaagcagacaatagaacagcttcaaaacctggaaaccagcctc
cgggaaaaagacgaaaaactctctgagctcctggccgacaaatccgcaatggacgaagaa
ctaaaacgcctgcgtgccgaagttgcaaaagcaaaagaagcttcagccctacagccggac
acacacgattattccgaagctgagactcgcgactacttcattgacctcctgcttaaagaa
gccggctgggcccttgacaaagaccaggacagggaatttgaagtctcaggcatgccaaac
gaaagcggggtcggttttgtagactatgtgctctggggagacgacggaaagccccttgcc
ctcgttgaagcaaagcgcactaccagagacccgcaggtcggccagcagcaggcaaaactc
tatgccgactgcctggaaaaacaattcgggcagaggccggtgatcttctattcaaacgga
tacgaaaactggatctgggacgattccaggtatcctccaagacaggtacagggtttctac
aaaaaatccgaacttgaactccttatccagcggcgcagcagccgcaggtctctttccgaa
gctaaaattaactcaaaaattgcagaccgctactatcagactcgtgccatccggcgcata
ggagaatcctttgaacatgacaacgacagaaaagctctggtagtaatggcaacaggcgct
ggtaagacccgtacagtcattgcactctgcgaccttctcatgcgctgcaactgggtcaaa
cgcgtgcttttcctggctgacagggtagctctggtcaaccaggcagtaaatgccttcaaa
aggcaccttccagactccgcacctgtgaaccttgtaacggaaaaggacaccgacgggaga
gtattcgtttcaacttatccgacaatgatgaagcagatagaagaaatgaacaacggacag
cgccgctttggatccgggcatttcgaccttgtaattattgatgaagcgcaccgttcggtt
ttcaagaagtacaaagcgattttcaactactttgactcttttcttgtgggccttacagca
acgcccaaaaatgaaattgaacgaaatacctacagcctctttgaccttgaacccggtgtt
ccaaccgatgcctaccagctcgaagaagctgtaaaagacggtttcctggttcctccaaaa
gcggtttcagtgccactgaagttccagcgccaggggatcaattacgacgacctctcagac
gaggataaagaacagtgggaatctctggattggggagacgaagacgaagaaatccctgaa
agggtggaagccgaagccgtcaacaagtggctgtttaacaaagacaccgtagataaagtg
ctggctcacctgatggaacggggcctgaaagtcgctggtggtgaccgcctgggcaaaact
atcctctttgcaaaaaatcaggctcatgctgagtatattgccgagcgtttcaatgccaat
tatccgaattttaaaggcgagtttgcccgtgttataacttttaagaccgaatacgcccag
agcctgatagacaatttctcggtaaaagaaaaagccccgcatattgccatctcagtggac
atgcttgacacggggatcgatgtaccggaggtcgtgaatctggtgttcttcaaactggtg
cgttccaggacaaagttctggcagatggtaggacgtggtactcgtctgtgtcctgacctt
ttcgaacccggaaaagataaacagttcttttatctttttgattattgccagaacctggag
tttttcagccagaaccctgaaaccactgacggttcacttggagattcgcttggtacgcgc
ctgttcaaatcacgtcttgaattactctcagagcttgaccgaaaacttgaatctgacagc
gattgtgcaaccggtgccgaggcctcggaaatatacggtgaaccaaaaactgaagccgaa
gtccgcttctcggttgccgaaacgctacaaaatgaaattgcctcaatgaacctggataac
ttcgtagtgcgtccaaggagacggttggtcgagaaatactcaaaacccgaagcctggata
aaactttccagcgaagacctctccgagatttcccatgaggtcgcgggccttccctcggaa
ttacaaccggaagccgaggaagcaaaacgttttgatctcttggtcctgaacctgcaactg
gctttactgcgtgccgagcctgcttttgagcgcctgagcaatcaggtcagagaaattgcc
ggtctccttgaagaaaaatcagccatcccaatggtacgtgaccagatggctctaattctg
gatgtgcagaccgatgaatggtgggagaatgtaacgactcccatgctggaaacacttaga
aggcatctacgtaacctggtaaaactgatagaaaaacaccacagaaaaccgctttacact
gacttcgaagacgaaataggcagcgaaaccgacgtggaattaccgggctttgctgaagcc
ggagattttgaaaagtttcgcgccaaaacccgtgctttccttctggaacatcaggacaac
acggttatccataagcttcggatgaatattccattgactgtaactgatcttgatgagctg
gagcggatactttcagaaagcgggctgggaggcccggaagaaattgcccgtgccaaagag
atgtcgcatggactcggcctcttcgtgcgctcactcattgggcttgatagagaagctgca
aaacagtcgttgaccacatttctgaaaggtaagaccctgactgcaaaccagatagaattc
ataaacttgattattgatcatctcacagaacacggagcaatggatgctgcattactttac
gagtcgccatttaccgaccttacgccacagggtccagatgggcttttcacctcaactcaa
attgatgaattaatagatacgttggagcagatcacggcaacagcattagtgcccccatgt
tcgcaacaaattactgcatga

DBGET integrated database retrieval system