Methanosarcina barkeri MS: MSBRM_1329
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Entry
MSBRM_1329 CDS
T03838
Name
(GenBank) Glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
mby
Methanosarcina barkeri MS
Pathway
mby00250
Alanine, aspartate and glutamate metabolism
mby00410
beta-Alanine metabolism
mby00430
Taurine and hypotaurine metabolism
mby00650
Butanoate metabolism
mby01100
Metabolic pathways
mby01110
Biosynthesis of secondary metabolites
mby01120
Microbial metabolism in diverse environments
mby02024
Quorum sensing
Module
mby_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MSBRM_1329
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MSBRM_1329
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MSBRM_1329
00430 Taurine and hypotaurine metabolism
MSBRM_1329
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSBRM_1329
Enzymes [BR:
mby01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
MSBRM_1329
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AKB54327
UniProt:
A0A0E3QSR8
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All DBs
Position
1764092..1765498
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AA seq
468 aa
AA seq
DB search
MISKKVNLETLDESKKYRVGAYSARYIQKVKEKGIPKYEFPEKGMSPRAAYQLVHDEQSL
DGNPFLNLASFVNTWMEPEADKLVMENINKNIIDIFEYPQTDKVIHRNIVNMLGRLFNGH
HTEFMGTATAGSSEAIMLGLLAHKWSWKNSGRGTGKPNIIFGNDAHVCWDKFAKYFDVEA
RKIPIDKDRRTITADAVSEQIDENTICVGCVLGTTFTGEIDPVKDINDLLLGYKEEKGWD
IPIHIDAASGGFILPFTEPDFEWDFRLERVKSINVSGHKYGLTYPGLGWLIFRDESDLPE
DLIFHVNYLGEMEDSYTLNFSGGSAMVAAQYYNILRFGKAGYTGIMKNILEVSQDLAERV
DRLGRFEMLNKGERLPIIAFKQKEETGYSLQQLSYKLREKGWIVPAYCLPENAADIEIMR
IVIRENFTPDMAAILVNDIENACQFFKNGRKSETKKPCPPDDGMVHIC
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaagaaagtaaatctggaaactttagatgagtctaaaaagtatcgtgttggt
gcatacagtgccagatatatccaaaaggtcaaagaaaaaggaattcccaagtacgaattc
cctgaaaaagggatgagtccaagagctgcttatcaactggtacatgatgaacagagtctc
gacggcaatcccttcctgaatctggcaagttttgtcaacacatggatggaaccagaagca
gacaagcttgtcatggaaaacataaataaaaatatcatagatattttcgaatatcctcaa
actgacaaagttattcacaggaatattgtgaatatgcttgggcgtctttttaatgggcat
cataccgaattcatgggtacggcaacagcaggctcttcagaagctataatgctgggtttg
ctggctcacaaatggagctggaaaaactcagggcgaggcacaggcaaaccaaacataatt
tttggaaacgatgctcacgtttgctgggataaatttgccaaatactttgacgtcgaagct
agaaaaattcctatagacaaagacagacgtacaattacggcagatgctgtctcagagcag
attgatgagaacacaatctgtgttggttgcgttttgggaacaacttttacaggagaaatc
gatcctgtaaaggatattaatgatttacttttgggatacaaggaagaaaaaggctgggac
atacccatccacatagatgctgcaagtggcggcttcatattgccatttaccgaacctgat
tttgagtgggacttcagactggaaagagtaaaatcgataaacgtttcaggacataaatac
ggattgacttatccgggccttggctggcttattttccgtgatgaaagtgaccttcccgaa
gacctgattttccatgtgaactacctcggagaaatggaagattcgtacaccctgaacttt
tcaggaggcagtgcgatggttgcggcccaatattacaatattttaagattcggaaaagct
ggttataccggaataatgaagaatatccttgaggtttctcaggatcttgctgagagggtt
gacagactgggccgtttcgaaatgctgaacaaaggagaaagacttcctataattgctttc
aagcaaaaagaggaaactggttattccctgcagcagctctcgtacaagctaagagagaag
ggctggatagttcccgcctactgtcttccagaaaatgcggcggatatcgagataatgcgc
attgtcataagagaaaatttcactccggatatggcagcaattcttgtaaacgatatcgaa
aatgcatgtcagttttttaaaaatggtagaaaatccgaaacaaaaaaaccctgcccgcct
gatgatggtatggtccatatttgctga
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