Methanosarcina barkeri MS: MSBRM_1547
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Entry
MSBRM_1547 CDS
T03838
Name
(GenBank) Chitin binding protein
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
mby
Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mby04040
]
MSBRM_1547
Ion channels [BR:
mby04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
MSBRM_1547
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Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
VWA
VWA_2
Glyco_hydro_123_N_2
VWA_3
GBD_Hemicentin
PKD_3
GH123_N
DUF1194
DUF4785_2nd
Motif
Other DBs
NCBI-ProteinID:
AKB54545
UniProt:
A0A0E3QT85
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Position
complement(2022573..2024852)
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AA seq
759 aa
AA seq
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MYGTPISNAKNAASLFVDYMEPDDMAGVVSFSTSARYDHHLTTLTNDNKSSIKDKIGKIS
ASGNTAIGSGLRYGLNDLLAYGDSSTPQAIVLLSDGLQNSGEHPNKVIPDITDNKIKVYT
VGLGSNADEGLLGDIATKTGGKYYYSPTENQLQNIYNDIVGEVTGLTPIKDLTFNMVKGD
HTFIAYKTDSTMKKAIASVFWPGSNVDLVLHKPDGSIVDPSEAESDPDIEYIASSTYKIY
KVSNPELGEWTMELTATDMPTGGEDVSVTVRAESTLSMSLSTDKDQYIQGESVKITSGIS
NGETKITTADVKSNITLPDSSINHLTLYDDGSHGDGGAKDGIYANFFDNTSLKGDYTVDA
TATGSLSDGSQFNRIEDSSFKIIQGTNSILLLPDNLSIEGKTGEKITKNITVSTSQALTS
VAITPTSLQSENGDIIDTSNIKVNPAAVNVSSGVPETILVTINIPESATSGNYTGKINAI
GTNGSDSCTIHLHVTDDNVTDTVPVANFTSSATSGKAPLKVKFTDTSTGSPTSWFWNFGD
GSKSFHQNPSHKYSKAGIYTVNLTVKNDIGRNTVTKTEYINVITKPVANFTSSATSGKAP
LKVKFTDTSTGTPAAWKWDFGDGSKSFHQNPTHKYSNAGVYNVSLKVKNAAGSNTVTKTN
YIKVITKPVASFTSNVTSGKAPLKVTFTDTSTGIPAKWKWSFGDGTISREQNPEHQYLQG
GSYKVTLTVSNAAGGNTITKTNYIKVTTNTRPGIYSENK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtacacctatttctaatgctaaaaacgcagcaagtctttttgttgactacatg
gagcctgatgacatggcaggagtcgtatcgttcagtacatctgcacgttatgatcatcac
cttactactcttactaatgacaataagagcagcattaaagataagataggaaaaatttca
gcctcaggtaatactgcaattggaagtggactgagatatggtttaaacgatttactagcc
tatggggattcaagtactccgcaggcaattgttttgctttcggatggactgcaaaacagt
ggggagcatccaaacaaagtgattcccgatattacagataataaaataaaagtttacact
gttggtcttggttctaatgctgatgaaggattgctaggcgacatcgctacgaaaacaggg
ggcaagtattattattctcctacagagaaccagttacagaatatatataatgacattgtt
ggagaagttactggcttgacacctattaaagatctcacttttaatatggttaagggtgac
catacatttatagcttacaaaacagacagtacaatgaaaaaagcaatcgcaagtgttttt
tggcccggaagtaatgtagacctcgtactgcacaagcctgatgggtcgatagtagatcct
tctgaggcagagtcagatcctgatattgagtacatagccagctccacttataagatctac
aaagtttcaaatccagaacttggagaatggactatggaattaacggcgaccgatatgcca
acaggaggagaggatgtttctgttactgtccgtgctgaatcaacattatccatgtccctt
tctacggataaagatcagtatatccagggtgaaagcgtaaagataacttcaggtatttct
aatggagaaactaagatcacaactgctgatgttaaatccaatatcactcttccagattcc
agtattaaccaccttacactgtatgatgatggtagccatggagacggtggcgcaaaggat
ggaatttatgcaaactttttcgataatacttctttaaagggagattatacggttgatgct
acagcaacaggaagtttatctgatggatctcagttcaacaggatcgaagacagttccttt
aaaataatccagggaacaaattcaatcttgcttttgccggataacttatccatagaggga
aagactggggaaaagattaccaagaacattactgtcagtacatcccaagccttaacatcg
gttgcaataacaccgacttcactccaatcagaaaacggtgatattattgataccagtaat
atcaaagtaaatccagcagcagtcaatgtttcttctggagtacctgaaactatcctagtt
acaataaatatacctgaaagtgcaacttccgggaattatactggcaaaattaatgcaatt
ggtacaaatggtagtgattcttgcactatacatctacatgtaacagatgataacgtaaca
gatactgtacctgttgcaaacttcaccagcagtgctacatcaggaaaagcaccattaaag
gttaaatttactgatacaagcacaggctccccaacttcctggttctggaactttggagac
ggatcaaagtcattccatcagaatccgagtcataagtattcaaaggcaggaatatatact
gttaacttaacagtgaagaatgatataggtcgtaacacggtaacaaaaacagaatatata
aatgtgataacaaaaccggttgcaaacttcaccagcagtgctacatcaggaaaagcacca
ttaaaggttaaatttactgacacaagcacaggaacacctgctgcatggaaatgggacttt
ggagacggatcaaagtcattccaccagaatccgactcataagtattcaaatgcaggggta
tataatgttagcttaaaagtaaagaatgctgcaggcagtaacacggtaacaaaaacaaat
tatataaaagtgataacaaaacctgttgcaagcttcaccagtaacgtcacatcaggcaaa
gcaccattaaaggttacttttactgacacaagcacaggaatcccggctaaatggaaatgg
agttttggagacggaacaatttcaagggaacagaatccagaacatcagtatttgcaggga
ggatcatataaggttactcttacagtaagcaatgctgcaggtggcaatacgataacaaaa
acaaattatataaaagtgacaacaaatacaaggcctggcatatattctgaaaacaaataa
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