Methanosarcina barkeri MS: MSBRM_1646
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Entry
MSBRM_1646 CDS
T03838
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mby
Methanosarcina barkeri MS
Brite
KEGG Orthology (KO) [BR:
mby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mby03032
]
MSBRM_1646
03400 DNA repair and recombination proteins [BR:
mby03400
]
MSBRM_1646
Enzymes [BR:
mby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MSBRM_1646
DNA replication proteins [BR:
mby03032
]
Prokaryotic type
DNA Topoisomerases
MSBRM_1646
DNA repair and recombination proteins [BR:
mby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSBRM_1646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HIN
Motif
Other DBs
NCBI-ProteinID:
AKB54644
UniProt:
A0A0E3QV63
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Position
complement(2154186..2157035)
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AA seq
949 aa
AA seq
DB search
MAKYEDEKKLEDELKKSYQSTLIPEEKDERMKNEDVSAPLTLEDSGKKLELNVSDPASDD
PEDKGMEPGQSGVTTILIENEMKRSYINYAMSVIVGRALPDARDGLKPVHRRVLFAMKEA
GITHDKPYKKSARVVGDVLGKYHPHGDTAVYDTIVRMVQDFSLRYPLIDGQGNFGSIDGD
SAAAMRYTEVRMDKIAEEMLVDIDKETVPFMPNYDGSMEEPEVLPAKLPNLLVNGSTGIA
VGMATNMAPHNIVEVIDGILMLIENPDITIPELMTVIKGPDFPTGAHILGTAGIKSAYMT
GRGALKIRAVAEIQEFKKDRQRIIVTELPYQVNKARMIENIAQLVRDKIIMGISDLRDES
DREGIRVVIELSRGTNPKVVLNQLYKHTQMETTFGVINLALVDGKPKELNLKELLEIYLE
YRMEIIQKRTLYGLKKSEERAHILDGLKIALDNIDEVVALIKGSANADEAKQGLMENFSL
DEIQSKAILDMRLQRLTGLETQKVLEELEGLVKLIGELREILESDELKYEIIRNELLELK
EKYGDARRTKIVQSAAEVREEDLIHEEEVVVTITNGGYIKRIPLRTYTMQRRGGRGIIGM
EMKEEDFVENLFISSTHNYILFFTNLGRIYWEKVYEIPEGSRQSRGKAIVNLLELKEGET
INAMIPVKEFDENHYLLMATRAGTIKKTPLSEFKNPRKSGIIAVTLDEDDELVRVLLTNG
KKEVLMVSKKGKAIRFSEEDVRPMGRTARGVRGMALDGPDDEVVSLDIVDETTTLLTVTE
NGFGKRTEYSQYPAHRRGGKGVITIITNERNGPVSRVRSVADDDELIFTSADGIIIRIPA
KDISIQGRNTQGVRIINLKLGDKVAGVARIQNGKAEKNLKLTAFKGKETIEATGAEDEAE
VPEGEAEDRDEFDELEDFEASSEAEETEETKEIGEDEAEEDEVEENEED
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatatgaagatgagaagaaactcgaagatgaattgaaaaaatcttatcagtct
acccttatccccgaagagaaagatgaaaggatgaaaaatgaggacgtttcggcccccctt
acactggaagactcgggcaaaaaactggaattaaacgtgtccgaccctgcttcagatgat
cccgaagacaaaggtatggagccaggtcagagtggggttactaccattcttatcgaaaat
gagatgaaacgctcttacattaactatgcgatgagtgtgatcgttggaagagctcttccc
gatgcaagggatggcttgaaaccagttcaccgcagggtcctttttgccatgaaagaggca
gggatcacgcatgacaagccttacaagaagtcagcccgtgtggtgggagacgttctcggt
aaatatcaccctcacggggatactgcagtctatgacactattgtgcgtatggtccaggat
ttctcccttcgttatcctttaattgacgggcagggaaacttcgggtcaatagatggtgac
tcggctgctgccatgcgttacactgaagtccgtatggacaaaatcgcagaagagatgctg
gtagacatcgacaaggaaacagttcccttcatgccaaattacgacgggtcaatggaagag
cctgaagtccttcctgcaaaacttccgaaccttcttgtaaatgggtccacaggtattgca
gtagggatggcaacaaacatggcccctcataacatcgtggaggtcattgacggcattctt
atgcttattgaaaatcctgacatcacgattcctgagctcatgaccgtaatcaaagggccg
gattttcctacaggtgctcatattcttgggacagcaggtataaaatcggcttatatgacc
ggaagaggggctttaaaaataagggcagttgccgagattcaggagtttaaaaaagacaga
cagcgaattatcgtaaccgagcttccttatcaggtaaacaaagccaggatgattgaaaat
attgctcagctagttcgggataagataatcatgggaatttccgaccttcgtgacgagtct
gacagggaaggaatcagggtagttatcgagctttctcgaggtacaaacccaaaggttgtt
ttaaaccagctttataagcatactcaaatggagaccacttttggggtaatcaatctggct
cttgttgacggaaaaccaaaagagctaaacctgaaggaacttcttgagatctatcttgaa
tacaggatggaaattatccagaagagaaccctttatggcctcaagaagagcgaggagaga
gctcatatccttgacgggctcaagattgcccttgataatatcgacgaagttgtcgctctg
ataaagggttcggcaaatgctgatgaagcaaagcagggtttaatggagaatttttccctt
gatgagattcagtcaaaggctatccttgatatgcgcctgcagcgcctgacaggacttgaa
acccagaaggtgcttgaggagctggaagggcttgtaaagctgataggtgaacttagggaa
atccttgagagtgatgaactcaagtacgaaataatcagaaatgaacttctggagctcaag
gaaaagtatggagatgctcgcagaacaaaaatcgtgcagtctgctgccgaagttagagaa
gaggatctgattcatgaagaagaagttgttgtcacgattactaatggaggctacataaag
cgtatcccactcaggacttacactatgcagcgccgtggaggcaggggtataatcggcatg
gaaatgaaggaagaagacttcgtggaaaatctcttcatttcctcaacccataactatatc
cttttcttcacaaaccttggcaggatctactgggaaaaagtatatgagatccctgaaggt
tcacggcagtccagaggcaaagccatagtaaaccttctggagcttaaggaaggcgaaaca
attaatgcaatgatcccggtcaaggagtttgacgaaaatcactacctgctcatggcaaca
agggcaggcacaatcaaaaagactcctctatcggaattcaagaacccgaggaaatcaggc
ataattgcggtcacccttgatgaagatgacgagctcgtaagagttctccttaccaacggg
aaaaaggaagtcctgatggtttcaaagaaaggtaaagctattcgcttttctgaagaagat
gtccgtcctatgggccgaactgcaagaggggtcaggggtatggctcttgacggcccggac
gacgaggttgtcagtctggacattgtcgatgaaaccacgaccctcctgaccgtaactgaa
aacggctttggcaagagaaccgagtactcccagtaccctgcgcaccgccgcggcggaaaa
ggcgtgataacaatcattaccaacgagaggaacggtccggtctcaagagtccggtccgta
gccgatgacgatgaacttatctttaccagtgccgacggcatcattatccgtatccctgcg
aaagatatctcaatccagggcagaaacacccagggcgtaaggatcattaatcttaaactc
ggcgacaaagtcgcaggtgtagcaagaattcaaaacggaaaagccgaaaagaatctgaaa
ctcacagctttcaaaggtaaagaaaccatagaagcaactggagccgaagatgaagccgag
gttccggagggcgaagccgaagatcgcgatgagtttgacgaattagaagactttgaagct
tctagcgaagccgaagaaaccgaggaaaccaaagaaataggagaggatgaagcagaagag
gatgaagtagaagaaaatgaagaagactga
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